RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 BUB1O43683 1085 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 KRT86O43790 486 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 KIAA0754O94854 1291 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 IGHV4-59P01825 116 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 FRMD6-AS1P0C7T7 363 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 PTPN6P29350 595 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 PPP2R1AP30153 589 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 CEACAM8P31997 349 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 CDR2Q01850 454 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 LTBQ06643 244 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 KRT81Q14533 505 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 RFTN1Q14699 578 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 CCDC6Q16204 474 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 TATDN3Q17R31 274 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 CCDC152Q4G0S7 254 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 TECRLQ5HYJ1 363 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 AWAT2Q6E213 333 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 NIPAL3Q6P499 406 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 TMEM207Q6UWW9 146 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 GOLGA7Q7Z5G4 137 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 PIGZQ86VD9 579 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 DMBX1Q8NFW5 382 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 CD99L2Q8TCZ2 262 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 SORCS1Q8WY21 1168 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 SMPDL3AQ92484 453 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 IGSF21Q96ID5 467 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 NEDD4LQ96PU5 975 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ERGIC2Q96RQ1 377 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 KRT12Q99456 494 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 NKX3-1Q99801 234 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 TMEM204Q9BSN7 226 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 WWP1Q9H0M0 922 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 THAP2Q9H0W7 228 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 BICC1Q9H694 974 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 EVA1AQ9H8M9 152 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 GDF3Q9NR23 364 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 SMPD3Q9NY59 655 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 P2RX2Q9UBL9 471 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 POMT2Q9UKY4 750 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 SF3B1O75533 1304 aaKnown RBP eCLIP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 RNF123Q5XPI4 1314 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 SPATA31D1Q6ZQQ2 1576 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 A0A087WZ39 114 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 TRBV4-1A0A0J9YWV2 114 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ERVV-2B6SEH9 535 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 K7EQM0 130 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 SLC1A7O00341 560 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 CXCL11O14625 94 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 XPO1O14980 1071 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 NDUFA7O95182 113 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZBTB11O95625 1053 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 FGF19O95750 216 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 SNHG28P0DPA3 235 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 SLC2A2P11168 524 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 RPL35AP18077 110 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 GPX3P22352 226 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 GLRA1P23415 457 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 CHI3L1P36222 383 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 MATKP42679 507 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 PTGFRP43088 359 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 SLC1A6P48664 564 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 NPY2RP49146 381 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 LBX1P52954 281 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 METAP1P53582 386 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 HERVK_113P63132 956 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ERVK-8P63133 956 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 C3AR1Q16581 482 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZNF74Q16587 644 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 CLPPQ16740 277 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZSWIM7Q19AV6 140 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 CCDC57Q2TAC2 916 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 KRTAP27-1Q3LI81 207 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZNF528Q3MIS6 628 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ATP1A1-AS1Q5TC04 95 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 CENPUQ71F23 418 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ASRGL1Q7L266 308 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ERASQ7Z444 233 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 NFE4Q86UQ8 179 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZNF679Q8IYX0 411 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 EIF1ADQ8N9N8 165 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 CNBD1Q8NA66 436 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 KBTBD8Q8NFY9 601 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 OR4D10Q8NGI6 311 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 OR1L3Q8NH93 324 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 C8orf46Q8TAG6 207 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 RDH11Q8TC12 318 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 P3H4Q92791 437 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 MCHR2Q969V1 340 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 SENP8Q96LD8 212 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 DEFB118Q96PH6 123 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 VPS35Q96QK1 796 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZNF607Q96SK3 696 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 RAB11FIP5Q9BXF6 653 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ERVK-6Q9BXR3 956 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 VPS37BQ9H9H4 285 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 FANCFQ9NPI8 374 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 SLC52A3Q9NQ40 469 aa3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 TECRQ9NZ01 308 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 ERRFI1Q9UJM3 462 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-208ENST00000505553 WIPI2Q9Y4P8 454 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms