RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SRSF6Q13247 344 aaKnown RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 BECN1Q14457 450 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 KRT31Q15323 416 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 SYCP1Q15431 976 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 GPR68Q15743 365 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 ZNF239Q16600 458 aaKnown RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 CA9Q16790 459 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 ALG11Q2TAA5 492 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 MS4A13Q5J8X5 152 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 FFAR4Q5NUL3 377 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 LYSMD4Q5XG99 296 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 SEL1L3Q68CR1 1132 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 LCLAT1Q6UWP7 414 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 FAM43BQ6ZT52 329 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 GSTA5Q7RTV2 222 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 APTXQ7Z2E3 356 aaKnown RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 UNC93AQ86WB7 457 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 FAM131BQ86XD5 332 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 MFN1Q8IWA4 741 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 CCAR2Q8N163 923 aaKnown RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 GOLGA5Q8TBA6 731 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 RNF139Q8WU17 664 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 ZNF606Q8WXB4 792 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 SHC3Q92529 594 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 CCDC47Q96A33 483 aaKnown RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 BIRC7Q96CA5 298 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 RRNAD1Q96FB5 475 aaKnown RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 OXNAD1Q96HP4 312 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 TBATAQ96M53 351 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 CFAP57Q96MR6 1250 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 PEBP4Q96S96 227 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 TSPAN18Q96SJ8 248 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 PSMB7Q99436 277 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 GABRG3Q99928 467 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 TM6SF2Q9BZW4 377 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 LHX5Q9H2C1 402 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 TCEAL2Q9H3H9 227 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 SUDS3Q9H7L9 328 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 CYP3A43Q9HB55 503 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 TMEM9BQ9NQ34 198 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 PRSS16Q9NQE7 514 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 FAM207AQ9NSI2 230 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 DDIT4Q9NX09 232 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 OR14J1Q9UGF5 321 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 GGA2Q9UJY4 613 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 LSM7Q9UK45 103 aaKnown RBP2.81□□□□□ -1.96
PTCD3-218ENST00000493430 PILRBQ9UKJ0 227 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 TFR2Q9UP52 801 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 NEU3Q9UQ49 428 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 SHANK1Q9Y566 2161 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 DOPEY2Q9Y3R5 2298 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 ASPMQ8IZT6 3477 aa2.81□□□□□ -1.96
PTCD3-218ENST00000493430 CHD6Q8TD26 2715 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 IGSF10Q6WRI0 2623 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 ZGRF1Q86YA3 2104 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 EXPH5Q8NEV8 1989 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 ITIH6Q6UXX5 1313 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 A0A1W2PQM1 296 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 A8MX80 341 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 F8VZ95 297 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 MAPK13O15264 365 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 DAB1O75553 588 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 NEBLO76041 1014 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 LUC7L3O95232 432 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 SMC2O95347 1197 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 PIGNO95427 931 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 FGF19O95750 216 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 EML2O95834 649 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 IGLV3-25P01717 112 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 ZNF806P0C7X5 589 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 RALAP11233 206 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 SKILP12757 684 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 P4HA1P13674 534 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 ITGA3P26006 1051 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 ABCD1P33897 745 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 DRD3P35462 400 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 MAGEA9P43362 315 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 POLR2FP61218 127 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 UBE2HP62256 183 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 RPL7AP62424 266 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 NUCB2P80303 420 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 ARF5P84085 180 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 POU5F1Q01860 360 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 LRRC63Q05C16 580 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 CNTN1Q12860 1018 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 TBX2Q13207 712 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 OLIG2Q13516 323 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 DCTN2Q13561 401 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 CDH18Q13634 790 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 DUOXA1Q1HG43 343 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 EOGTQ5NDL2 527 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 SNX30Q5VWJ9 437 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 ATL3Q6DD88 541 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 TXNRD3NBQ6F5E7 133 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 PM20D1Q6GTS8 502 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 CAVIN1Q6NZI2 390 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 NCEH1Q6PIU2 408 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 RFLNAQ6ZTI6 216 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 Q75L30 129 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 LPCAT2Q7L5N7 544 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms