RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.64□□□□□ -0.07
PLOD3-216ENST00000489927 SPACA6W5XKT8 324 aa14.64□□□□□ -0.07
PLOD3-216ENST00000489927 NIPBLQ6KC79 2804 aaeCLIP14.63□□□□□ -0.07
PLOD3-216ENST00000489927 E7ESA3 106 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 HRKO00198 91 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 FGF17O60258 216 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 CCNT2O60583 730 aaKnown RBP14.63□□□□□ -0.07
PLOD3-216ENST00000489927 SH3BGRLO75368 114 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 SCELO95171 688 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 IGKV3-11P04433 115 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 COX7A2P14406 83 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 CD1DP15813 335 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 CPN2P22792 545 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 KCNJ2P63252 427 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 IGLV3-21P80748 117 aaPredicted RBP14.63□□□□□ -0.07
PLOD3-216ENST00000489927 IRF8Q02556 426 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 CHIT1Q13231 466 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 HIST2H2ACQ16777 129 aaPredicted RBP14.63□□□□□ -0.07
PLOD3-216ENST00000489927 PAGE2BQ5JRK9 111 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 SLC22A10Q63ZE4 541 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 HIST2H2AA3Q6FI13 130 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 LYPD8Q6UX82 237 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 DGAT2L6Q6ZPD8 337 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 CAPN12Q6ZSI9 719 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 PDPRQ8NCN5 879 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 NUBPLQ8TB37 319 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 PAQR8Q8TEZ7 354 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 NINJ1Q92982 152 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 PPWD1Q96BP3 646 aaKnown RBP14.63□□□□□ -0.07
PLOD3-216ENST00000489927 SENP5Q96HI0 755 aaPredicted RBP14.63□□□□□ -0.07
PLOD3-216ENST00000489927 POLDIP3Q9BY77 421 aaKnown RBP14.63□□□□□ -0.07
PLOD3-216ENST00000489927 TRIM31Q9BZY9 425 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 ZNF358Q9NW07 568 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 CD274Q9NZQ7 290 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 PTBP2Q9UKA9 531 aaKnown RBP14.63□□□□□ -0.07
PLOD3-216ENST00000489927 EML6Q6ZMW3 1958 aa14.63□□□□□ -0.07
PLOD3-216ENST00000489927 FAM221AA4D161 298 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 FAM47E-STBD1D6RA91 191 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 SAP18O00422 153 aaKnown RBP14.62□□□□□ -0.07
PLOD3-216ENST00000489927 TGFB1P01137 390 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 GABRA1P14867 456 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 SSR2P43308 183 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 KIR2DL3P43628 341 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 STT3AP46977 705 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 TBCCQ15814 346 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 AP5B1Q2VPB7 878 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 TMEM35AQ53FP2 167 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 RIPPLY2Q5TAB7 128 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 PRAMEF20Q5VT98 475 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 TGIF2LYQ8IUE0 185 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 ZBED8Q8IZ13 594 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 CHDHQ8NE62 594 aaPredicted RBP14.62□□□□□ -0.07
PLOD3-216ENST00000489927 SLC22A8Q8TCC7 542 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 SPACA9Q96E40 222 aaPredicted RBP14.62□□□□□ -0.07
PLOD3-216ENST00000489927 TSPAN17Q96FV3 270 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 DGAT2Q96PD7 388 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 KRT12Q99456 494 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 GPATCH1Q9BRR8 931 aaKnown RBP14.62□□□□□ -0.07
PLOD3-216ENST00000489927 SORBS1Q9BX66 1292 aaKnown RBP14.62□□□□□ -0.07
PLOD3-216ENST00000489927 PHACTR1Q9C0D0 580 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 CLEC4MQ9H2X3 399 aaPredicted RBP14.62□□□□□ -0.07
PLOD3-216ENST00000489927 PROK2Q9HC23 129 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 PRM3Q9NNZ6 103 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 ZFP64Q9NPA5 681 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 B4GALT7Q9UBV7 327 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 ST6GALNAC2Q9UJ37 374 aa14.62□□□□□ -0.07
PLOD3-216ENST00000489927 HRNRQ86YZ3 2850 aaPredicted RBP14.61□□□□□ -0.07
PLOD3-216ENST00000489927 LRRC3CA6NJW4 275 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 CXorf49A8MYA2 514 aaPredicted RBP14.61□□□□□ -0.07
PLOD3-216ENST00000489927 PCNAP12004 261 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 TCP1P17987 556 aaKnown RBP14.61□□□□□ -0.07
PLOD3-216ENST00000489927 UQCRC1P31930 480 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 CASP2P42575 452 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 ATP6V0D1P61421 351 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 E2F2Q14209 437 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 CEBPEQ15744 281 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 SEM1Q6ZVN7 128 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 CHSY3Q70JA7 882 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 LAS2Q8IYD9 372 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 ULK2Q8IYT8 1036 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 LRRC25Q8N386 305 aaPredicted RBP14.61□□□□□ -0.07
PLOD3-216ENST00000489927 FBXW8Q8N3Y1 598 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 BBOF1Q8ND07 529 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 FAM13CQ8NE31 585 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 OR10G3Q8NGC4 313 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 DOK4Q8TEW6 326 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 EXT2Q93063 718 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 RBM18Q96H35 190 aaKnown RBP14.61□□□□□ -0.07
PLOD3-216ENST00000489927 FBXL20Q96IG2 436 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 UBXN10Q96LJ8 280 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 CD244Q9BZW8 370 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 SLC6A15Q9H2J7 730 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 OR51B5Q9H339 312 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 RPF2Q9H7B2 306 aaKnown RBP14.61□□□□□ -0.07
PLOD3-216ENST00000489927 RASSF1Q9NS23 344 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 TRMT1Q9NXH9 659 aaKnown RBP14.61□□□□□ -0.07
PLOD3-216ENST00000489927 CRIM1Q9NZV1 1036 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 RNF112Q9ULX5 631 aa14.61□□□□□ -0.07
PLOD3-216ENST00000489927 BOKQ9UMX3 212 aaPredicted RBP14.61□□□□□ -0.07
PLOD3-216ENST00000489927 CHCHD2Q9Y6H1 151 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms