RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 SMG9Q9H0W8 520 aaKnown RBP13.56□□□□□ -0.24
RER1-207ENST00000488353 SPNS1Q9H2V7 528 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 SLC32A1Q9H598 525 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 LIN7BQ9HAP6 207 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 TXNL4BQ9NX01 149 aaKnown RBP13.56□□□□□ -0.24
RER1-207ENST00000488353 CLEC2DQ9UHP7 191 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 MBD1Q9UIS9 605 aaPredicted RBP13.56□□□□□ -0.24
RER1-207ENST00000488353 FZD4Q9ULV1 537 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 DOCK6Q96HP0 2047 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 WWP2O00308 870 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 SCN2BO60939 215 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 POU2F1P14859 743 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 LAG3P18627 525 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 AP1S1P61966 158 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 MLLT11Q13015 90 aaPredicted RBP13.55□□□□□ -0.24
RER1-207ENST00000488353 C1DQ13901 141 aaKnown RBP13.55□□□□□ -0.24
RER1-207ENST00000488353 NCF4Q15080 339 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 TEAD4Q15561 434 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 ZNF628Q5EBL2 1059 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 UBE2R2Q712K3 238 aaPredicted RBP13.55□□□□□ -0.24
RER1-207ENST00000488353 CDH24Q86UP0 819 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 PHC2Q8IXK0 858 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 NXPE1Q8N323 547 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 FAM46DQ8NEK8 389 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 OR9Q2Q8NGE9 314 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 UPRTQ96BW1 309 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 ALG14Q96F25 216 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 SLC25A19Q9HC21 320 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 ING4Q9UNL4 249 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 PCDHB11Q9Y5F2 797 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 TRBV5-4A0A0C4DH59 114 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 ABHD14A-ACY1A0A1B0GW23 586 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 ZAR1LA6NP61 321 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 TGM5O43548 720 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 NUDT7P0C024 238 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 MSL3P1P0C860 447 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 ZNF250P15622 560 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 ITPKAP23677 461 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 APEX1P27695 318 aaKnown RBP13.55□□□□□ -0.24
RER1-207ENST00000488353 CCR7P32248 378 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 CNR2P34972 360 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 SPAM1P38567 509 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 ABATP80404 500 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 SF1Q15637 639 aaKnown RBP13.55□□□□□ -0.24
RER1-207ENST00000488353 CDKN3Q16667 212 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.55□□□□□ -0.24
RER1-207ENST00000488353 LRRC73Q5JTD7 316 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 ANKRD54Q6NXT1 300 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 MACC1Q6ZN28 852 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 SLC37A3Q8NCC5 494 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 HJURPQ8NCD3 748 aaPredicted RBP13.55□□□□□ -0.24
RER1-207ENST00000488353 MSANTD3Q96H12 275 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 GFM1Q96RP9 751 aaKnown RBP13.55□□□□□ -0.24
RER1-207ENST00000488353 PPIL3Q9H2H8 161 aaKnown RBP13.55□□□□□ -0.24
RER1-207ENST00000488353 FAM120CQ9NX05 1096 aaKnown RBP13.55□□□□□ -0.24
RER1-207ENST00000488353 COQ3Q9NZJ6 369 aa13.55□□□□□ -0.24
RER1-207ENST00000488353 MYO7AQ13402 2215 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 NPIPB15A6NHN6 443 aaPredicted RBP13.54□□□□□ -0.24
RER1-207ENST00000488353 HLA-EP13747 358 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 SDC2P34741 201 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 WNT3P56703 355 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 ZNF267Q14586 743 aaPredicted RBP13.54□□□□□ -0.24
RER1-207ENST00000488353 IFI44LQ53G44 452 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 LIPKQ5VXJ0 399 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 FRMPD2BQ6IN97 320 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 TMEM65Q6PI78 240 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 Q6ZNB5 142 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 NANOGP1Q8N7R0 232 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 GALNT11Q8NCW6 608 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 PROKR2Q8NFJ6 384 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 CSGALNACT1Q8TDX6 532 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 GTPBP3Q969Y2 492 aaKnown RBP13.54□□□□□ -0.24
RER1-207ENST00000488353 TRIM43Q96BQ3 446 aaPredicted RBP13.54□□□□□ -0.24
RER1-207ENST00000488353 MTERF3Q96E29 417 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 PAWRQ96IZ0 340 aaKnown RBP13.54□□□□□ -0.24
RER1-207ENST00000488353 ATG10Q9H0Y0 220 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 PRM3Q9NNZ6 103 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 FZD3Q9NPG1 666 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 FAM8A1Q9UBU6 413 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 CORO2BQ9UQ03 480 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 MYOFQ9NZM1 2061 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 A0A1W2PRU2 124 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 FABP7O15540 132 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 ENTPD6O75354 484 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 SH3BGRLO75368 114 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 HBQ1P09105 142 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 ACPPP15309 386 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 PCGF2P35227 344 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 SOX9P48436 509 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 CRISP1P54107 249 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 SRP54P61011 504 aaKnown RBP13.54□□□□□ -0.24
RER1-207ENST00000488353 UGT8Q16880 541 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 ATP13A5Q4VNC0 1218 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 DGKKQ5KSL6 1271 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 PLEKHM3Q6ZWE6 761 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 VRK3Q8IV63 474 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.54□□□□□ -0.24
RER1-207ENST00000488353 GHDCQ8N2G8 530 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 OR8J2Q8NGG1 315 aa13.54□□□□□ -0.24
RER1-207ENST00000488353 MAL2Q969L2 176 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms