RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 A6NIN4 97 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 IGHA2P01877 340 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 CDKN1CP49918 316 aaPredicted RBP20.26■□□□□ 0.83
SDF4-206ENST00000478938 FKBP1AP62942 108 aaKnown RBP20.26■□□□□ 0.83
SDF4-206ENST00000478938 CRHR2Q13324 411 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 SPIN4Q56A73 249 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 C1orf52Q8N6N3 182 aaKnown RBP20.26■□□□□ 0.83
SDF4-206ENST00000478938 MRPS24Q96EL2 167 aaKnown RBP20.26■□□□□ 0.83
SDF4-206ENST00000478938 SLC38A3Q99624 504 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 EVA1AQ9H8M9 152 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 ZNF624Q9P2J8 865 aaPredicted RBP20.26■□□□□ 0.83
SDF4-206ENST00000478938 EXTL2Q9UBQ6 330 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 CPA4Q9UI42 421 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 SLC28A1O00337 649 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 CPEP16870 476 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 CXCL2P19875 107 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 GDF5P43026 501 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 MAZP56270 477 aaKnown RBP20.26■□□□□ 0.83
SDF4-206ENST00000478938 FABP5Q01469 135 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 FGL1Q08830 312 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 LY6KQ17RY6 165 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 NOTUMQ6P988 496 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 ELMOD3Q96FG2 381 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 PANX1Q96RD7 426 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 THAP7Q9BT49 309 aaPredicted RBP20.26■□□□□ 0.83
SDF4-206ENST00000478938 NLNQ9BYT8 704 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 SAP130Q9H0E3 1048 aa20.26■□□□□ 0.83
SDF4-206ENST00000478938 FAM227AF5H4B4 570 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 FPGTO14772 594 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 MPZL2O60487 215 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 TSPAN3O60637 253 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 TGM6O95932 706 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 ALDOBP05062 364 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 IGFBP1P08833 259 aaPredicted RBP20.25■□□□□ 0.83
SDF4-206ENST00000478938 ELK1P19419 428 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 RAB13P51153 203 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 SLC10A7Q0GE19 358 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 C9orf57Q5W0N0 161 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 FAM198BQ6UWH4 519 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 ZFP41Q8N8Y5 198 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 UXS1Q8NBZ7 420 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 FAM46DQ8NEK8 389 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 CHIAQ9BZP6 476 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 FZD3Q9NPG1 666 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 ALPK3Q96L96 1907 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 RAB19A4D1S5 217 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 ULK1O75385 1050 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 GUCA1CO95843 209 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 ZNF865P0CJ78 1059 aaPredicted RBP20.25■□□□□ 0.83
SDF4-206ENST00000478938 OGNP20774 298 aaKnown RBP20.25■□□□□ 0.83
SDF4-206ENST00000478938 CD9P21926 228 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 ETV5P41161 510 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 ACVR1Q04771 509 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 SMAD2Q15796 467 aaKnown RBP20.25■□□□□ 0.83
SDF4-206ENST00000478938 UNC5DQ6UXZ4 953 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 AQP11Q8NBQ7 271 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 WDR20Q8TBZ3 569 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 KCTD13Q8WZ19 329 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 RFT1Q96AA3 541 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 PGAP3Q96FM1 320 aaPredicted RBP20.25■□□□□ 0.83
SDF4-206ENST00000478938 DOHHQ9BU89 302 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 TSSK6Q9BXA6 273 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 BABAM2Q9NXR7 383 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 NLGN3Q9NZ94 848 aa20.25■□□□□ 0.83
SDF4-206ENST00000478938 ZNF219Q9P2Y4 722 aaPredicted RBP20.25■□□□□ 0.83
SDF4-206ENST00000478938 ZFR2Q9UPR6 939 aaKnown RBP20.25■□□□□ 0.83
SDF4-206ENST00000478938 PQLC2LA1A4F0 135 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 EEF1E1O43324 174 aaKnown RBP20.24■□□□□ 0.83
SDF4-206ENST00000478938 SGCEO43556 437 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 SIX6O95475 246 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 TCRBP04435 133 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 ITPKAP23677 461 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 CRISP1P54107 249 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 IL2P60568 153 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 ERVK-25P63136 954 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 IL10RBQ08334 325 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 NCF4Q15080 339 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 TCTE1Q5JU00 501 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 OR2G6Q5TZ20 316 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 RAET1GQ6H3X3 334 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 SLC27A4Q6P1M0 643 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 LAPTM4BQ86VI4 370 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 OR4A15Q8NGL6 344 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 NELL1Q92832 810 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 NSUN3Q9H649 340 aaKnown RBP20.24■□□□□ 0.83
SDF4-206ENST00000478938 GSN-AS1Q9NRJ2 163 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 ING1Q9UK53 422 aaPredicted RBP20.24■□□□□ 0.83
SDF4-206ENST00000478938 GBF1Q92538 1859 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 SHISA3A0PJX4 238 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 ANXA2P2A6NMY6 339 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 MPTX1A8MV57 137 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 TLR4O00206 839 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 NDUFS3O75489 264 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 GLUD1P00367 558 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 ACPPP15309 386 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 PLK5Q496M5 336 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 MEDAGQ5VYS4 303 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 QSOX2Q6ZRP7 698 aa20.24■□□□□ 0.83
SDF4-206ENST00000478938 TRMT11Q7Z4G4 463 aaKnown RBP20.24■□□□□ 0.83
SDF4-206ENST00000478938 ZNF454Q8N9F8 522 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms