RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	AJUBA	Q96IF1	538 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CPB2	Q96IY4	423 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF285	Q96NJ3	590 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	NEDD4L	Q96PU5	975 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	TAAR1	Q96RJ0	339 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	MCCC1	Q96RQ3	725 aa	Predicted RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	VAT1	Q99536	393 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	C7orf50	Q9BRJ6	194 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CBWD1	Q9BRT8	395 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	COPS4	Q9BT78	406 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	PTDSS2	Q9BVG9	487 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	BBS2	Q9BXC9	721 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CDCA4	Q9BXL8	241 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	GPR63	Q9BZJ6	419 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZDHHC5	Q9C0B5	715 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	SMOC2	Q9H3U7	446 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ABHD16B	Q9H3Z7	469 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ASB7	Q9H672	318 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	OPA3	Q9H6K4	179 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	HEXA-AS1	Q9H8Q6	139 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ANKRA2	Q9H9E1	313 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZBTB20	Q9HC78	741 aa	Predicted RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	PXMP2	Q9NR77	195 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	BABAM2	Q9NXR7	383 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	GTSE1	Q9NYZ3	720 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ARHGAP28	Q9P2N2	729 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CPNE7	Q9UBL6	633 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	SPAST	Q9UBP0	616 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	AFF4	Q9UHB7	1163 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	DPP7	Q9UHL4	492 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	PSORS1C1	Q9UIG5	152 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	GJD2	Q9UKL4	321 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	MGAT4A	Q9UM21	535 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	TBX20	Q9UMR3	447 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	NCKAP1	Q9Y2A7	1128 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC6A5	Q9Y345	797 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	PCDHB7	Q9Y5E2	793 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ALG5	Q9Y673	324 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520		U3KQV3	271 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520		V9GYH0	126 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF236	Q9UL36	1845 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	KIAA1217	Q5T5P2	1943 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	TRAV20	A0A0B4J274	112 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	WDR27	A2RRH5	827 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	RHPN2P1	A8MT19	583 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ARHGEF33	A8MVX0	844 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	LACTBL1	A8MY62	500 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520		E9PQ18	207 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF670-ZNF695	F2Z2N8	137 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	INMT-MINDY4	F8WBC2	141 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	NR5A2	O00482	541 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	PPEF2	O14830	753 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	GSTA4	O15217	222 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	LYRM1	O43325	122 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	AKR7A2	O43488	359 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC28A2	O43868	658 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	KIAA0513	O60268	411 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	PRAF2	O60831	178 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	MITF	O75030	526 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	NIPSNAP2	O75323	286 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SCO1	O75880	301 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	FADS2	O95864	444 aa	Known RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	KNG1	P01042	644 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	CALCA	P01258	141 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	IFNA10	P01566	189 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	IFNG	P01579	166 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	LTF	P02788	710 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	HMGCR	P04035	888 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	HRG	P04196	525 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	TSPAN19	P0C672	248 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	CLEC2L	P0C7M8	214 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	HSMCR30	P0CW71	290 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	PIP	P12273	146 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	MYCL	P12524	364 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	PRF1	P14222	555 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	UGT2B7	P16662	529 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	CD53	P19397	219 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	FPR1	P21462	350 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	AGXT	P21549	392 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	EDNRB	P24530	442 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	PAX6	P26367	422 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	MIP	P30301	263 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	DNAJA1	P31689	397 aa	Known RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	LIPA	P38571	399 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	CD79B	P40259	229 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	RFC3	P40938	356 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	MAGEA2	P43356	314 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	KIR2DL3	P43628	341 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	RARRES1	P49788	294 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	LBX1	P52954	281 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	DHODH	Q02127	395 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	OGDH	Q02218	1023 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	PRKCZ	Q05513	592 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	DMP1	Q13316	513 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	RAPSN	Q13702	412 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	FGL2	Q14314	439 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	DMC1	Q14565	340 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	IRF3	Q14653	427 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	VEPH1	Q14D04	833 aa		4.49	□□□□□ -1.69

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