RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 CASRP41180 1078 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 SERPINB4P48594 390 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 KRT6CP48668 564 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 WDR4P57081 412 aaKnown RBP11.6□□□□□ -0.55
APTX-220ENST00000476858 ZNF33BQ06732 778 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 CASP8Q14790 479 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 UGT3A2Q3SY77 523 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 CRB2Q5IJ48 1285 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 CFAP157Q5JU67 520 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 CCNYL2Q5T2Q4 361 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 CYP20A1Q6UW02 462 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 ISLR2Q6UXK2 745 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 Q6ZS92 163 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 ZNF227Q86WZ6 799 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 DNAJB14Q8TBM8 379 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 M1APQ8TC57 530 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 WNT2BQ93097 391 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 CCDC126Q96EE4 140 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 PGM2Q96G03 612 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 CNDP1Q96KN2 507 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 SIGLEC12Q96PQ1 595 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 IQCGQ9H095 443 aaKnown RBP11.6□□□□□ -0.55
APTX-220ENST00000476858 CDCP1Q9H5V8 836 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 BRF2Q9HAW0 419 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 TMBIM4Q9HC24 238 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 VPS29Q9UBQ0 182 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 CES1P1Q9UKY3 287 aa11.6□□□□□ -0.55
APTX-220ENST00000476858 CLDN4O14493 209 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 PCDH17O14917 1159 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 DPM1O60762 260 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 NME6O75414 186 aaPredicted RBP11.59□□□□□ -0.55
APTX-220ENST00000476858 ZIC2O95409 532 aaPredicted RBP11.59□□□□□ -0.55
APTX-220ENST00000476858 IFNA16P05015 189 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 TUBBP07437 444 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 CT62P0C5K7 136 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 NR2F6P10588 404 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 HPDP32754 393 aaPredicted RBP11.59□□□□□ -0.55
APTX-220ENST00000476858 TSFMP43897 325 aaKnown RBP11.59□□□□□ -0.55
APTX-220ENST00000476858 CSTF3Q12996 717 aaKnown RBP11.59□□□□□ -0.55
APTX-220ENST00000476858 ACER2Q5QJU3 275 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 NDUFAF5Q5TEU4 345 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 KANK2Q63ZY3 851 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 Q6ZSR9 355 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 ANKRD42Q8N9B4 389 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 ADAMTS18Q8TE60 1221 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 NUDT8Q8WV74 236 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 TLCD1Q96CP7 247 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 C3orf30Q96M34 536 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 ADAP2Q9NPF8 381 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 LYARQ9NX58 379 aaKnown RBP11.59□□□□□ -0.55
APTX-220ENST00000476858 VTI1BQ9UEU0 232 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 ZDHHC2Q9UIJ5 367 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 PHF11Q9UIL8 331 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 EXO1Q9UQ84 846 aaKnown RBP11.59□□□□□ -0.55
APTX-220ENST00000476858 DLGAP4Q9Y2H0 992 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 POLR3HQ9Y535 204 aaPredicted RBP11.59□□□□□ -0.55
APTX-220ENST00000476858 HEMK1Q9Y5R4 338 aaPredicted RBP11.59□□□□□ -0.55
APTX-220ENST00000476858 DNAJC15Q9Y5T4 150 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 SPTA1P02549 2419 aa11.59□□□□□ -0.55
APTX-220ENST00000476858 C17orf105B2RV13 164 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 AZIN1O14977 448 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 NPHS1O60500 1241 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 ERLIN1O75477 346 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 IL3P08700 152 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 LINC00032P0C843 101 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 H2AFXP16104 143 aaPredicted RBP11.58□□□□□ -0.56
APTX-220ENST00000476858 BGNP21810 368 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 TACR1P25103 407 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 CD96P40200 585 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 ARFIP1P53367 373 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 MAPK12P53778 367 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 MAGOHP61326 146 aaKnown RBP11.58□□□□□ -0.56
APTX-220ENST00000476858 STX4Q12846 297 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 TUBA3CQ13748 450 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 RCN2Q14257 317 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 ELAVL1Q15717 326 aaKnown RBP11.58□□□□□ -0.56
APTX-220ENST00000476858 LTB4RQ15722 352 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 EXT1Q16394 746 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 TUBA3EQ6PEY2 450 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 CISD2Q8N5K1 135 aaKnown RBP11.58□□□□□ -0.56
APTX-220ENST00000476858 B3GNT7Q8NFL0 401 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 SLC2A12Q8TD20 617 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 MGARPQ8TDB4 240 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 ZNF721Q8TF20 911 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 C16orf78Q8WTQ4 265 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 PNPLA2Q96AD5 504 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 CENPKQ9BS16 269 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 OR8D2Q9GZM6 311 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 ANKRA2Q9H9E1 313 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 KCNK9Q9NPC2 374 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 STMN3Q9NZ72 180 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 ANAPC2Q9UJX6 822 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 ADAM29Q9UKF5 820 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 PPIEQ9UNP9 301 aaKnown RBP11.58□□□□□ -0.56
APTX-220ENST00000476858 MRPS33Q9Y291 106 aaKnown RBP11.58□□□□□ -0.56
APTX-220ENST00000476858 B3GNT3Q9Y2A9 372 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 PCDHGB7Q9Y5F8 929 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 PCDHGA10Q9Y5H3 936 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 PCDHA9Q9Y5H5 950 aa11.58□□□□□ -0.56
APTX-220ENST00000476858 RELNP78509 3460 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms