RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 MCOLN1Q9GZU1 580 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 MRPL39Q9NYK5 338 aaKnown RBP13.17□□□□□ -0.3
BRAT1-203ENST00000467558 CH25HO95992 272 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 ALDOCP09972 364 aaKnown RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 HOXC8P31273 242 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 MNDAP41218 407 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 P2RY2P41231 377 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 KIR2DS3Q14952 304 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 RGNQ15493 299 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 Q6ZSR6 202 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 RFLNAQ6ZTI6 216 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 KRT74Q7RTS7 529 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 JSRP1Q96MG2 331 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 SLC30A3Q99726 388 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 G6PC3Q9BUM1 346 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 PDFQ9HBH1 243 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 ABCB9Q9NP78 766 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 CXXC1Q9P0U4 656 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 FAM240BA0A1B0GVZ2 78 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 HYKKA2RU49 373 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 RNASET2O00584 256 aaKnown RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 INMTO95050 263 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 SNX4O95219 450 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 CD2P06729 351 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 FESP07332 822 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 UGT3A2Q3SY77 523 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 MEDAGQ5VYS4 303 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 SBSNQ6UWP8 590 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 SLC22A15Q8IZD6 547 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 TSEN15Q8WW01 171 aaKnown RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 COQ7Q99807 217 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 COMMD4Q9H0A8 199 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 LMAN1LQ9HAT1 526 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 SPATA2Q9UM82 520 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 CPNE3O75131 537 aaKnown RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 CLEC3AO75596 197 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 IL1RNP18510 177 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 CLDN2P57739 230 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 CCSAPQ6IQ19 270 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 HSDL2Q6YN16 418 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 MCEMP1Q8IX19 187 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 CLIP4Q8N3C7 705 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 GNPDA2Q8TDQ7 276 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 ARRDC3Q96B67 414 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 TESCQ96BS2 214 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 TMEM19Q96HH6 336 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 SOX17Q9H6I2 414 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 PRSS16Q9NQE7 514 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 SNTG1Q9NSN8 517 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 TOR1BO14657 336 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 TRIM3O75382 744 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 CDC123O75794 336 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 OR2B3O76000 313 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 ECDO95905 644 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 SERPINA3P01011 423 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 TNFRSF4P43489 277 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 GBX2P52951 348 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 SIM1P81133 766 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 SCN1BQ07699 218 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 GINS1Q14691 196 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 EXOC3L2Q2M3D2 409 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 RUNDC3AQ59EK9 446 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 VTCN1Q7Z7D3 282 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 C11orf24Q96F05 449 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-203ENST00000467558 MND1Q9BWT6 205 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 ANKRA2Q9H9E1 313 aa13.16□□□□□ -0.3
BRAT1-203ENST00000467558 HOXC11O43248 304 aaPredicted RBP13.15□□□□□ -0.3
BRAT1-203ENST00000467558 TSC22D2O75157 780 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 SORBS2O94875 1100 aaKnown RBP13.15□□□□□ -0.3
BRAT1-203ENST00000467558 DUSP3P51452 185 aaPredicted RBP13.15□□□□□ -0.3
BRAT1-203ENST00000467558 NPRL3Q12980 569 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 PON3Q15166 354 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 C5orf22Q49AR2 442 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 GGTA1PQ4G0N0 100 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 NAGSQ8N159 534 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 OR52P1PQ8NH57 321 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 LKAAEAR1Q8TD35 194 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 ZDHHC1Q8WTX9 485 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 DCSTAMPQ9H295 470 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 NUP205Q92621 2012 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 ANHXE9PGG2 379 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 SOCS2O14508 198 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 DDCP20711 480 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 TCEA1P23193 301 aaKnown RBP13.15□□□□□ -0.3
BRAT1-203ENST00000467558 SLC27A4Q6P1M0 643 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 NANOGNBQ7Z5D8 188 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 PLXDC1Q8IUK5 500 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 OR52E1Q8NGJ3 308 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 NETO1Q8TDF5 533 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 ADAMTS18Q8TE60 1221 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 TRIM43Q96BQ3 446 aaPredicted RBP13.15□□□□□ -0.3
BRAT1-203ENST00000467558 KCTD7Q96MP8 289 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 TBX5Q99593 518 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 SMOXQ9NWM0 555 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 KIR2DS5A0A0G2JLQ3 304 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 A0A0G2JNG1 304 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 UBE2QL1A1L167 161 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 KIR2DS3K7RE56 304 aa13.15□□□□□ -0.3
BRAT1-203ENST00000467558 GFRA2O00451 464 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms