RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 CNTN2Q02246 1040 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CAMK2DQ13557 499 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CDH18Q13634 790 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 VWC2Q2TAL6 325 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 GPR33Q49SQ1 333 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CCDC184Q52MB2 194 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 HERC4Q5GLZ8 1057 aaPredicted RBP2.79□□□□□ -1.96
XRN1-206ENST00000467077 TCEAL5Q5H9L2 206 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 ARMC4Q5T2S8 1044 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CST9LP1Q5W188 147 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CES4AQ5XG92 561 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 OR4A47Q6IF82 309 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 NOTUMQ6P988 496 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 FRRS1Q6ZNA5 592 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CHST3Q7LGC8 479 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CENPVQ7Z7K6 275 aaPredicted RBP2.79□□□□□ -1.96
XRN1-206ENST00000467077 KLHDC1Q8N7A1 406 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 OR7A2PQ8NGA2 310 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 C11orf45Q8TAV5 145 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 HDAC11Q96DB2 347 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 DYNLL2Q96FJ2 89 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CFAP57Q96MR6 1250 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 AGAP4Q96P64 663 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CDH20Q9HBT6 801 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.79□□□□□ -1.96
XRN1-206ENST00000467077 NDE1Q9NXR1 346 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CHKBQ9Y259 395 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 DDX49Q9Y6V7 483 aaKnown RBP2.79□□□□□ -1.96
XRN1-206ENST00000467077 SCN10AQ9Y5Y9 1956 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CFAP47Q6ZTR5 3102 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 NCOR1O75376 2440 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 DOCK5Q9H7D0 1870 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 A0A1W2PPK0 400 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 CASTOR2A6NHX0 329 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 ASB14A6NK59 587 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 SRRM4A7MD48 611 aaKnown RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 MBTPS2O43462 519 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 FYNP06241 537 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 CSN3P07498 182 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 SAGP10523 405 aaPredicted RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 PCGF2P35227 344 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 ZFP36L2P47974 494 aaKnown RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 ASCL1P50553 236 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 RAB28P51157 221 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 ZNF41P51814 821 aaPredicted RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 VCPP55072 806 aaKnown RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 IRX4P78413 519 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 GABPAQ06546 454 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 GPM6BQ13491 265 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 PTPRCAPQ14761 206 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 TMEM132DQ14C87 1099 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 TAB1Q15750 504 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 NPTX1Q15818 432 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 PTGISQ16647 500 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 EPC2Q52LR7 807 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 KRBOX4Q5JUW0 171 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 IL17RELQ6ZVW7 336 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 ASCL5Q7RTU5 278 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 RPAINQ86UA6 219 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 TICAM2Q86XR7 235 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 FBXO16Q8IX29 292 aaPredicted RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 TTC30BQ8N4P2 665 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 SLC4A11Q8NBS3 891 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 SDR42E1Q8WUS8 393 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 MRPS27Q92552 414 aaKnown RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 MRPL38Q96DV4 380 aaKnown RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 ZMAT2Q96NC0 199 aaKnown RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 MAP3K3Q99759 626 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 CPNE1Q99829 537 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 NAA11Q9BSU3 229 aaPredicted RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 MTG1Q9BT17 334 aaPredicted RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 PRRG4Q9BZD6 226 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 CRNKL1Q9BZJ0 848 aaKnown RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 FAM129AQ9BZQ8 928 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 HOXD1Q9GZZ0 328 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 RAVER2Q9HCJ3 691 aaKnown RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 ISY1Q9ULR0 285 aaKnown RBP2.78□□□□□ -1.96
XRN1-206ENST00000467077 SLC6A5Q9Y345 797 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 WIPI2Q9Y4P8 454 aa2.78□□□□□ -1.96
XRN1-206ENST00000467077 WDFY3Q8IZQ1 3526 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 RAD50Q92878 1312 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 LOC105371242A0A075B767 164 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 F5H6K3 240 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 GPRIN2O60269 458 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 CEACAM4O75871 244 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 ACSL3O95573 720 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 ATP1B1P05026 303 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 ATP5BP06576 529 aaKnown RBP2.77□□□□□ -1.97
XRN1-206ENST00000467077 CCDC175P0C221 793 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 OR52Z1P0C646 297 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 FOLR2P14207 255 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 EPCAMP16422 314 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 MGMTP16455 207 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 ERCC2P18074 760 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 CYP11B2P19099 503 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 ACHEP22303 614 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 SOX3P41225 446 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 OR3A2P47893 321 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 CLDN15P56746 228 aa2.77□□□□□ -1.97
XRN1-206ENST00000467077 POLR2LP62875 67 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms