RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CDX1P47902 265 aaPredicted RBP4□□□□□ -1.77
LINC00393-202ENST00000452852 BNC1Q01954 994 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 LTBQ06643 244 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 SLC20A2Q08357 652 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 DMP1Q13316 513 aaPredicted RBP4□□□□□ -1.77
LINC00393-202ENST00000452852 ANGPT1Q15389 498 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 NPTX1Q15818 432 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 CA9Q16790 459 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 UGT3A2Q3SY77 523 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 NDUFAF5Q5TEU4 345 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 ATF7IP2Q5U623 682 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 FAM166AQ6J272 317 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 CCNI2Q6ZMN8 369 aaPredicted RBP4□□□□□ -1.77
LINC00393-202ENST00000452852 C1orf186Q6ZWK4 172 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 PHLDB2Q86SQ0 1253 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 ANKRD46Q86W74 232 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 CATSPER3Q86XQ3 398 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 CROCCP3Q8IVE0 287 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 RNF113BQ8IZP6 322 aaKnown RBP4□□□□□ -1.77
LINC00393-202ENST00000452852 C1orf87Q8N0U7 546 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 ELMOD1Q8N336 334 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 CCNYQ8ND76 341 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 NPEPL1Q8NDH3 523 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 SPATA22Q8NHS9 363 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 MAGEC3Q8TD91 643 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 ELP5Q8TE02 316 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 TANKQ92844 425 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 DHX58Q96C10 678 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 SCMH1Q96GD3 660 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 MTMR9Q96QG7 549 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 MYADMQ96S97 322 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 SLX1AQ9BQ83 275 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 LLPHQ9BRT6 129 aaKnown RBP4□□□□□ -1.77
LINC00393-202ENST00000452852 ATG101Q9BSB4 218 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 TCHPQ9BT92 498 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 POLR3CQ9BUI4 534 aaPredicted RBP4□□□□□ -1.77
LINC00393-202ENST00000452852 CCDC94Q9BW85 323 aaPredicted RBP4□□□□□ -1.77
LINC00393-202ENST00000452852 NT5C3AQ9H0P0 336 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 SLC38A7Q9NVC3 462 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 TAS2R3Q9NYW6 316 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 WNT16Q9UBV4 365 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 AMDHD2Q9Y303 409 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 CLCA3PQ9Y6N3 262 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 FANCMQ8IYD8 2048 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 DOCK6Q96HP0 2047 aa4□□□□□ -1.77
LINC00393-202ENST00000452852 MED19A0JLT2 244 aaPredicted RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 C5orf60A6NFR6 353 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 C15orf62A8K5M9 175 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 LAD1O00515 517 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 PI15O43692 258 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 WDR1O75083 606 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 RAD51DO75771 328 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 B3GAT3O94766 335 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 PTBP3O95758 552 aaKnown RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 IFNB1P01574 187 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 LIPFP07098 398 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 DCNP07585 359 aaKnown RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 IGHV4-30-4P0DP06 118 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 CKMT2P17540 419 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 CYP2A7P20853 494 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 HOXA9P31269 272 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 NKX2-1P43699 371 aaPredicted RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 OR3A1P47881 315 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 PEX3P56589 373 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 OSTNP61366 133 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 HTD2P86397 168 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 GCNT1Q02742 428 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 RASGEF1BQ0VAM2 473 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 ZNF155Q12901 538 aaPredicted RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 ILF2Q12905 390 aaKnown RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 TRAF3Q13114 568 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 HTR4Q13639 388 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 PDE7AQ13946 482 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 ZRSR1Q15695 479 aaKnown RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 ELFN2Q5R3F8 820 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 LRRC38Q5VT99 294 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 KCTD11Q693B1 232 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 OR7E24Q6IFN5 339 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 ASCL5Q7RTU5 278 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 AMIGO1Q86WK6 493 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 SPATA2LQ8IUW3 424 aaPredicted RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 KLHDC8AQ8IYD2 350 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 ELMOD2Q8IZ81 293 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 CPSF7Q8N684 471 aaKnown RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 L3MBTL4Q8NA19 623 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 IRGQQ8WZA9 623 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 ZNF707Q96C28 371 aaPredicted RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 PYCR2Q96C36 320 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 MTBPQ96DY7 904 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 DTD2Q96FN9 168 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 MED30Q96HR3 178 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 FAM71F1Q96KD3 344 aaPredicted RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 PKP2Q99959 881 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 TIPINQ9BVW5 301 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 CUEDC2Q9H467 287 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 Q9H8V8 135 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 PRMT8Q9NR22 394 aaPredicted RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 GSN-AS1Q9NRJ2 163 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 PHPT1Q9NRX4 125 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms