RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 IGFBP1P08833 259 aaPredicted RBP17.8■□□□□ 0.44
PTPA-223ENST00000452489 CXCL2P19875 107 aa17.8■□□□□ 0.44
PTPA-223ENST00000452489 RPL9P32969 192 aaKnown RBP17.8■□□□□ 0.44
PTPA-223ENST00000452489 GRIN2CQ14957 1233 aa17.8■□□□□ 0.44
PTPA-223ENST00000452489 SPIN4Q56A73 249 aa17.8■□□□□ 0.44
PTPA-223ENST00000452489 NOTUMQ6P988 496 aa17.8■□□□□ 0.44
PTPA-223ENST00000452489 USP45Q70EL2 814 aa17.8■□□□□ 0.44
PTPA-223ENST00000452489 NSMAFQ92636 917 aa17.8■□□□□ 0.44
PTPA-223ENST00000452489 MRPS24Q96EL2 167 aaKnown RBP17.8■□□□□ 0.44
PTPA-223ENST00000452489 THAP7Q9BT49 309 aaPredicted RBP17.8■□□□□ 0.44
PTPA-223ENST00000452489 NLNQ9BYT8 704 aa17.8■□□□□ 0.44
PTPA-223ENST00000452489 EVA1AQ9H8M9 152 aa17.8■□□□□ 0.44
PTPA-223ENST00000452489 FZD3Q9NPG1 666 aa17.8■□□□□ 0.44
PTPA-223ENST00000452489 EXTL2Q9UBQ6 330 aa17.8■□□□□ 0.44
PTPA-223ENST00000452489 ZNF214Q9UL59 606 aaPredicted RBP17.8■□□□□ 0.44
PTPA-223ENST00000452489 EVPLQ92817 2033 aa17.8■□□□□ 0.44
PTPA-223ENST00000452489 SHISA3A0PJX4 238 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 FPGTO14772 594 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 GUCA1CO95843 209 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 ACPPP15309 386 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 ELK1P19419 428 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 OGNP20774 298 aaKnown RBP17.79■□□□□ 0.44
PTPA-223ENST00000452489 HNF1BP35680 557 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 OR2G6Q5TZ20 316 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 RAET1GQ6H3X3 334 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 UNC5DQ6UXZ4 953 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 C1orf52Q8N6N3 182 aaKnown RBP17.79■□□□□ 0.44
PTPA-223ENST00000452489 ZFP41Q8N8Y5 198 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 AQP11Q8NBQ7 271 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 UXS1Q8NBZ7 420 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 FAM46DQ8NEK8 389 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 SLC38A3Q99624 504 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 DOHHQ9BU89 302 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 NSUN3Q9H649 340 aaKnown RBP17.79■□□□□ 0.44
PTPA-223ENST00000452489 NLGN3Q9NZ94 848 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 ZNF624Q9P2J8 865 aaPredicted RBP17.79■□□□□ 0.44
PTPA-223ENST00000452489 PRAMEF25A6NGN4 478 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 SLC28A1O00337 649 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 MPZL2O60487 215 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 PEX11BO96011 259 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 GLUD1P00367 558 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 TCRBP04435 133 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 ALDOBP05062 364 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 ETV5P41161 510 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 RAB13P51153 203 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 CRISP1P54107 249 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 IL2P60568 153 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 FGL1Q08830 312 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 TMEM132BQ14DG7 1078 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 NCF4Q15080 339 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 FBXO47Q5MNV8 452 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 LRRC52Q8N7C0 313 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 REPS2Q8NFH8 660 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 ELMOD3Q96FG2 381 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 CHIAQ9BZP6 476 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 TMEM30AQ9NV96 361 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 EMC3Q9P0I2 261 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 PRKAG2Q9UGJ0 569 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 ANKRD36A6QL64 1941 aa17.79■□□□□ 0.44
PTPA-223ENST00000452489 TLR4O00206 839 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 NDUFS3O75489 264 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 SIX6O95475 246 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 S100A6P06703 90 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 GPX2P18283 190 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 ITPKAP23677 461 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 MAZP56270 477 aaKnown RBP17.78■□□□□ 0.44
PTPA-223ENST00000452489 IL10RBQ08334 325 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 SMAD2Q15796 467 aaKnown RBP17.78■□□□□ 0.44
PTPA-223ENST00000452489 PLK5Q496M5 336 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 FAM198BQ6UWH4 519 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 LAPTM4BQ86VI4 370 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 WDR20Q8TBZ3 569 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 CD200R1Q8TD46 325 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 RFT1Q96AA3 541 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 TSSK6Q9BXA6 273 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 PQLC2LA1A4F0 135 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 ANXA2P2A6NMY6 339 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 SOX14O95416 240 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 CPSF4O95639 269 aaKnown RBP17.78■□□□□ 0.44
PTPA-223ENST00000452489 TGM6O95932 706 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 GASTP01350 101 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 GANABQ14697 944 aaKnown RBP17.78■□□□□ 0.44
PTPA-223ENST00000452489 PCBP2Q15366 365 aaKnown RBP eCLIP17.78■□□□□ 0.444e-6■■□□□ 11.8
PTPA-223ENST00000452489 TCTE1Q5JU00 501 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 MEDAGQ5VYS4 303 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 QSOX2Q6ZRP7 698 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 TRMT11Q7Z4G4 463 aaKnown RBP17.78■□□□□ 0.44
PTPA-223ENST00000452489 ZNF687Q8N1G0 1237 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 SYNPOQ8N3V7 929 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 MAPKAP1Q9BPZ7 522 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 GSN-AS1Q9NRJ2 163 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 OSER1Q9NX31 292 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 BABAM2Q9NXR7 383 aa17.78■□□□□ 0.44
PTPA-223ENST00000452489 ING1Q9UK53 422 aaPredicted RBP17.78■□□□□ 0.44
PTPA-223ENST00000452489 ZFR2Q9UPR6 939 aaKnown RBP17.78■□□□□ 0.44
PTPA-223ENST00000452489 SF3B6Q9Y3B4 125 aaKnown RBP17.78■□□□□ 0.44
PTPA-223ENST00000452489 IQCF5A8MTL0 148 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 MPTX1A8MV57 137 aa17.77■□□□□ 0.44
PTPA-223ENST00000452489 CASC3O15234 703 aaKnown RBP17.77■□□□□ 0.44
PTPA-223ENST00000452489 EEF1E1O43324 174 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms