RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 FCRL4Q96PJ5 515 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 OR1F2PQ96R84 312 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 BCL7BQ9BQE9 202 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 TMEM43Q9BTV4 400 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 RAB11FIP5Q9BXF6 653 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 PKIBQ9C010 78 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 VIPAS39Q9H9C1 493 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 STARD5Q9NSY2 213 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 PLEK2Q9NYT0 353 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 FLRT3Q9NZU0 649 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 ERVK-18Q9QC07 812 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 KCNS2Q9ULS6 477 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 SLC7A7Q9UM01 511 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 SATB2Q9UPW6 733 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 PTGDR2Q9Y5Y4 395 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 IGLV5-39A0A0G2JS06 123 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 A0A1W2PPI3 338 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 LINC01553A4QN01 128 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 YJEFN3A6XGL0 299 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 NPIPB8E9PQR5 432 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 ARPC3O15145 178 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 ZSCAN12O43309 604 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 BUB1O43683 1085 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 KRT86O43790 486 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 FCMRO60667 390 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 CSF2P04141 144 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 CCDC130P13994 396 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 EFNA1P20827 205 aaPredicted RBP4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 NT5EP21589 574 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 LHCGRP22888 699 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 GLRA1P23415 457 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 CAPGP40121 348 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 OR1G1P47890 313 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 PPIAP62937 165 aaKnown RBP4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 DRP2Q13474 957 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 EXOSC2Q13868 293 aaKnown RBP4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 BTG3Q14201 252 aaPredicted RBP4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 GRB14Q14449 540 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 RBM39Q14498 530 aaKnown RBP4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 KRT81Q14533 505 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 KIR2DS3Q14952 304 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 RCN1Q15293 331 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 DPYSL2Q16555 572 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 CLPPQ16740 277 aaPredicted RBP4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 BCL7AQ4VC05 210 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 TDRD12Q587J7 1177 aaKnown RBP4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 DCAF10Q5QP82 559 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 ARMC12Q5T9G4 340 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 LYPLAL1Q5VWZ2 237 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 ERICH6BQ5W0A0 696 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 RTL6Q6ICC9 239 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 SLC18B1Q6NT16 456 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 NANOGNBQ7Z5D8 188 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 SPRED1Q7Z699 444 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 VPS36Q86VN1 386 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 KMT5CQ86Y97 462 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 WDR49Q8IV35 697 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 CNGA4Q8IV77 575 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 PHC2Q8IXK0 858 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 ARFGAP2Q8N6H7 521 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 C17orf47Q8NEP4 570 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 NFAM1Q8NET5 270 aaPredicted RBP4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 OR2T12Q8NG77 320 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 OR4C15Q8NGM1 316 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 TRMT10AQ8TBZ6 339 aaKnown RBP4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 SPRYD4Q8WW59 207 aaPredicted RBP4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 TMEM37Q8WXS4 190 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 SLC47A1Q96FL8 570 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 C20orf173Q96LM9 149 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 GSDMAQ96QA5 445 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 ACCSQ96QU6 501 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 WWP1Q9H0M0 922 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 MTIF3Q9H2K0 278 aaKnown RBP4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 EXO5Q9H790 373 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 UBTD1Q9HAC8 227 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 RNF186Q9NXI6 227 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 ZNF319Q9P2F9 582 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 ONECUT1Q9UBC0 465 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 LRP12Q9Y561 859 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 COLEC10Q9Y6Z7 277 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 R4GN57 208 aa4.72□□□□□ -1.65
TM9SF3-202ENST00000443638 CLDN5O00501 218 aa4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 KRT33AO76009 404 aa4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 STK17BO94768 372 aa4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 PMS2P2O95744 297 aa4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 VTNP04004 478 aa4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 UMODP07911 640 aa4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 DARSP14868 501 aaKnown RBP4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 NCF2P19878 526 aaPredicted RBP4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 HOXD3P31249 432 aaPredicted RBP4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 CYLC1P35663 651 aaPredicted RBP4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 ACADSBP45954 432 aa4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 RPS8P62241 208 aaKnown RBP4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 BST1Q10588 318 aa4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 ELAVL3Q14576 367 aaKnown RBP4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 EXT1Q16394 746 aa4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 CDKN3Q16667 212 aa4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 PCK2Q16822 640 aa4.71□□□□□ -1.66
TM9SF3-202ENST00000443638 ZNF699Q32M78 642 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms