RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 DIMT1Q9UNQ2 313 aaKnown RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 EXO1Q9UQ84 846 aaKnown RBP14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 PRKAB1Q9Y478 270 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 AUP1Q9Y679 476 aa14.04□□□□□ -0.16
NCKIPSD-204ENST00000416649 CEP290O15078 2479 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 A0A1W2PPL8 197 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 CBX4O00257 560 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 FAM157BP0CG42 384 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 LAMP1P11279 417 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 RPL9P32969 192 aaKnown RBP14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 NUP62P37198 522 aaPredicted RBP14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 RGRP47804 291 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 GBX2P52951 348 aaPredicted RBP14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 PPP3R1P63098 170 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 SELENOWP63302 87 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 ZNF91Q05481 1191 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 KCNC3Q14003 757 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 NCF4Q15080 339 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 TCTN1Q2MV58 587 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 COL28A1Q2UY09 1125 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 IFI44LQ53G44 452 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 CLLU1Q5K131 121 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 ARTNQ5T4W7 220 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 ZNF730Q6ZMV8 503 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 TRILQ7L0X0 811 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 HDDC2Q7Z4H3 204 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 OR6M1Q8NGM8 313 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 TM9SF4Q92544 642 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 ZC3HAV1LQ96H79 300 aaKnown RBP14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 SORBS1Q9BX66 1292 aaKnown RBP14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 MCOLN1Q9GZU1 580 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 PPP1R3EQ9H7J1 279 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 FOLH1BQ9HBA9 442 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 ZNF624Q9P2J8 865 aaPredicted RBP14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 FAM8A1Q9UBU6 413 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 MRPS7Q9Y2R9 242 aaKnown RBP14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 TDRD15B5MCY1 1934 aaKnown RBP14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 YY2O15391 372 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 KCNJ13O60928 360 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 ACSM4P0C7M7 580 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 EBLN1P0CF75 366 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 RPL17P18621 184 aaKnown RBP14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 B2MP61769 119 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 MS4A13Q5J8X5 152 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 RTL4Q6ZR62 310 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 FAM92BQ6ZTR7 304 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 KANSL1Q7Z3B3 1105 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 LINC00518Q8N0U6 118 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 THEM5Q8N1Q8 247 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 GHDCQ8N2G8 530 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 SRFBP1Q8NEF9 429 aaKnown RBP14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 SGTBQ96EQ0 304 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 KLHL15Q96M94 604 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 RBP7Q96R05 134 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 GPR62Q9BZJ7 368 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 IFT46Q9NQC8 304 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 DHRS7Q9Y394 339 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 PCDHGB7Q9Y5F8 929 aa14.03□□□□□ -0.16
NCKIPSD-204ENST00000416649 STK16O75716 305 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 DHFRP00374 187 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 ALDH9A1P49189 494 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 RGS4P49798 205 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 TPMTP51580 245 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 GPR176Q14439 515 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 LGALSLQ3ZCW2 172 aaPredicted RBP14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 FBXL22Q6P050 247 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 CASP12Q6UXS9 341 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 RASSF6Q6ZTQ3 369 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 SCD5Q86SK9 330 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 SYNPOQ8N3V7 929 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 TEX26Q8N6G2 289 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 C11orf65Q8NCR3 313 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 GATAD2BQ8WXI9 593 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 BOCQ9BWV1 1114 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 RNF208Q9H0X6 261 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 ABCG5Q9H222 651 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 HRH3Q9Y5N1 445 aa14.02□□□□□ -0.16
NCKIPSD-204ENST00000416649 CCDC88CQ9P219 2028 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 A0A0D9SEW6 157 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 PIPSLA2A3N6 862 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 POM121CA8CG34 1229 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 LGALS8O00214 317 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 PRRG1O14668 218 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 ETFAP13804 333 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 ATF6P18850 670 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 DNASE1P24855 282 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 HTR7P34969 479 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 TBX4P57082 545 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 HSF2Q03933 536 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 BCL2L1Q07817 233 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 IL10RBQ08334 325 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 MLLT11Q13015 90 aaPredicted RBP14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 VEZF1Q14119 521 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 TAF1AQ15573 450 aaPredicted RBP14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 NOXRED1Q6NXP6 359 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 ADGRG3Q86Y34 549 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 GPALPP1Q8IXQ4 340 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 PIAS4Q8N2W9 510 aaPredicted RBP14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 IQCF1Q8N6M8 205 aa14.02□□□□□ -0.17
NCKIPSD-204ENST00000416649 NANOGP1Q8N7R0 232 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms