RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SENP5Q96HI0 755 aaPredicted RBP13.13□□□□□ -0.31
HLA-DQB2-229ENST00000411527 TMEM79Q9BSE2 394 aa13.13□□□□□ -0.31
HLA-DQB2-229ENST00000411527 TBCDQ9BTW9 1192 aa13.13□□□□□ -0.31
HLA-DQB2-229ENST00000411527 EFCAB11Q9BUY7 163 aa13.13□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CNOT10Q9H9A5 744 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB2-229ENST00000411527 ZFP64Q9NPA5 681 aa13.13□□□□□ -0.31
HLA-DQB2-229ENST00000411527 BOKQ9UMX3 212 aaPredicted RBP13.13□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SPACA6W5XKT8 324 aa13.13□□□□□ -0.31
HLA-DQB2-229ENST00000411527 NIPBLQ6KC79 2804 aaeCLIP13.13□□□□□ -0.31
HLA-DQB2-229ENST00000411527 ACANP16112 2415 aa13.13□□□□□ -0.31
HLA-DQB2-229ENST00000411527 MAP1AP78559 2803 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 A6NNC1 897 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SH3BGRLO75368 114 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 STK16O75716 305 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FAM155BO75949 473 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CD22P20273 847 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 BMP5P22003 454 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CPN2P22792 545 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 GGT5P36269 586 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 MSH2P43246 934 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 HSPA7P48741 367 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 TRPC1P48995 793 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SLC12A2P55011 1212 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 LAPTM5Q13571 262 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FRG1Q14331 258 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 MORF4L2Q15014 288 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 HIST2H2ACQ16777 129 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 AP5B1Q2VPB7 878 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FLYWCH1Q4VC44 716 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 HIST2H2AA3Q6FI13 130 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SEM1Q6ZVN7 128 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 GPSM1Q86YR5 675 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 C9orf40Q8IXQ3 194 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FBXW8Q8N3Y1 598 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 LIX1Q8N485 282 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 RELL2Q8NC24 303 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FAM13CQ8NE31 585 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 NEIL3Q8TAT5 605 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 NUBPLQ8TB37 319 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 PPWD1Q96BP3 646 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 WDR34Q96EX3 536 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 LRRC46Q96FV0 321 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 RBM18Q96H35 190 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 JSRP1Q96MG2 331 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DGAT2Q96PD7 388 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 ALPK1Q96QP1 1244 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DERL2Q9GZP9 239 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SLC6A15Q9H2J7 730 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 ZNF703Q9H7S9 590 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 POPDC3Q9HBV1 291 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SH2D2AQ9NP31 389 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 TRMT1Q9NXH9 659 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 PCDHGB3Q9Y5G1 929 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 MPDZO75970 2070 aa13.12□□□□□ -0.31
HLA-DQB2-229ENST00000411527 HRKO00198 91 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DVL2O14641 736 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DYRK3O43781 588 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FGF17O60258 216 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 IGKV3-11P04433 115 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DRD2P14416 443 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FOSL1P15407 271 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 STT3AP46977 705 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 ASCL1P50553 236 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 ARL4CP56559 192 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 ADAM8P78325 824 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 IGLV3-21P80748 117 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 IRF8Q02556 426 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 TBL3Q12788 808 aaKnown RBP13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CHIT1Q13231 466 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 PDK4Q16654 411 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 PAGE2BQ5JRK9 111 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SULT1C3Q6IMI6 304 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 LYPD8Q6UX82 237 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DGAT2L6Q6ZPD8 337 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 LRRC25Q8N386 305 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SLC15A4Q8N697 577 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 NAXEQ8NCW5 288 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 C7orf57Q8NEG2 295 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 TNIP2Q8NFZ5 429 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DOK4Q8TEW6 326 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 ZNF473Q8WTR7 871 aaKnown RBP13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FAM222BQ8WU58 562 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SPACA9Q96E40 222 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 KRT12Q99456 494 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SH3GL2Q99962 352 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 MS4A8Q9BY19 250 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 PHACTR1Q9C0D0 580 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 RHOJQ9H4E5 214 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 PROK2Q9HC23 129 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 ACKR4Q9NPB9 350 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DMRT3Q9NQL9 472 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DLL4Q9NR61 685 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 MOCS1Q9NZB8 636 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CD274Q9NZQ7 290 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CNIH4Q9P003 139 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CBLCQ9ULV8 474 aa13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 RPH3AQ9Y2J0 694 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQB2-229ENST00000411527 LRRC3CA6NJW4 275 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SAP18O00422 153 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CCNT2O60583 730 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms