RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 GSTM3P21266 225 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 GCAP28676 217 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 TIA1P31483 386 aaKnown RBP eCLIP11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 KDELR2P33947 212 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 GJA8P48165 433 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 NR0B1P51843 470 aaKnown RBP11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 SH3BP2P78314 561 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 KCNAB2Q13303 367 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 C4orf46Q504U0 113 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 DGLUCYQ7Z3D6 616 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 TMED4Q7Z7H5 227 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 LHFPL3Q86UP9 236 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 OR5AR1Q8NGP9 310 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 NSMAFQ92636 917 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 EHD1Q9H4M9 534 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 DNAJC15Q9Y5T4 150 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 TNS1Q9HBL0 1735 aaKnown RBP11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 SRPRAP08240 638 aaKnown RBP11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 AK4P27144 223 aaPredicted RBP11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 SHC2P98077 582 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 NRROSQ86YC3 692 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 SDR16C5Q8N3Y7 309 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 MAL2Q969L2 176 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 POLDIP3Q9BY77 421 aaKnown RBP11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 RNF38Q9H0F5 515 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 DKKL1Q9UK85 242 aa11.05□□□□□ -0.64
PCDHGA8-201ENST00000398604 CAPN14A8MX76 684 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 BHMG1C9JSJ3 638 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 CDRT1O95170 752 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 RNH1P13489 461 aaKnown RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 ETFAP13804 333 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 PFKLP17858 780 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 MAN2A2P49641 1150 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 OR4D2P58180 307 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 CDKL1Q00532 357 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 GALK2Q01415 458 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 HSF2Q03933 536 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 PUDPQ08623 228 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 FOXJ1Q92949 421 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 TMEM41AQ96HV5 264 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 MUS81Q96NY9 551 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 ERMAPQ96PL5 475 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 CMKLR1Q99788 373 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 CD320Q9NPF0 282 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 STOX2Q9P2F5 926 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 LRRC37AA6NMS7 1700 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 SNAP29O95721 258 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 SPARCP09486 303 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 TNFRSF1BP20333 461 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 IL4RP24394 825 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 SLC6A4P31645 630 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 OTX2P32243 289 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 CD68P34810 354 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 KCNC1P48547 511 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 IST1P53990 364 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 TPTEP56180 551 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 WDR5P61964 334 aaKnown RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 PMS2P3Q13401 168 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 NCEH1Q6PIU2 408 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 ZC3H14Q6PJT7 736 aaKnown RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 GALNT12Q8IXK2 581 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 KLHDC8AQ8IYD2 350 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 DNAJA4Q8WW22 397 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 ZNF689Q96CS4 500 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 CCDC106Q9BWC9 280 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 C1orf21Q9H246 121 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 PRH1P02810 166 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 PROZP22891 400 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 GRPRP30550 384 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 RORCP51449 518 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 CAPZA1P52907 286 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 HNRNPKP61978 463 aaKnown RBP eCLIP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 ZNF234Q14588 700 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 TRAM2Q15035 370 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 FAM69BQ5VUD6 431 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 DNM1P34Q6PK57 102 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 ERMP1Q7Z2K6 904 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 TCEAL8Q8IYN2 117 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 PNLDC1Q8NA58 520 aaKnown RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 RPLP0P6Q8NHW5 317 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 FAM129BQ96TA1 746 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 CPEB1Q9BZB8 566 aaKnown RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 BRF2Q9HAW0 419 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 ANKMY1Q9P2S6 941 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 COL11A2P13942 1736 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 ARFGEF1Q9Y6D6 1849 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 SOCS2O14508 198 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 VEGFDO43915 354 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 ZNF821O75541 412 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 ITGA10O75578 1167 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 BCAS2O75934 225 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 CEBPBP17676 345 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 AP3S2P59780 193 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 PLCXD2Q0VAA5 305 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 GAS6Q14393 721 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 VMACQ2NL98 169 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 GTDC1Q4AE62 458 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 LIPJQ5W064 366 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 LRFN4Q6PJG9 635 aa11.04□□□□□ -0.64
PCDHGA8-201ENST00000398604 FIGLAQ6QHK4 219 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms