RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 BDKRB1P46663 353 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 CLDN8P56748 225 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 SNX16P57768 344 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 SOWAHAQ2M3V2 549 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 PLAG1Q6DJT9 500 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 ZNF549Q6P9A3 640 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 HSDL2Q6YN16 418 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 Q6ZSR9 355 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 BTN2A1Q7KYR7 527 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 KCNJ9Q92806 393 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 KIAA1143Q96AT1 154 aaPredicted RBP11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 NELL2Q99435 816 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 TGIF2Q9GZN2 237 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 PTTG3PQ9NZH4 202 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 TMEM82A0PJX8 343 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 GABRR3A8MPY1 467 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 FAM72CH0Y354 149 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 J3KR12 359 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 ADAM12O43184 909 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 TPST2O60704 377 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 PFKMP08237 780 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 ACPPP15309 386 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 FEN1P39748 380 aaKnown RBP11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 ACTR1BP42025 376 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 SLC6A3Q01959 620 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 MEF2AQ02078 507 aaPredicted RBP11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 SMAD4Q13485 552 aaKnown RBP11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 INSL4Q14641 139 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 SMCO1Q147U7 214 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 EIF4HQ15056 248 aaKnown RBP11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 TOMM20Q15388 145 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 DUOXA1Q1HG43 343 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 SLC39A12Q504Y0 691 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 FAM72AQ5TYM5 149 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 OVOS1Q6IE37 1185 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 FAM72DQ6L9T8 149 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 FAHD1Q6P587 224 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 ZNF730Q6ZMV8 503 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 FAM72BQ86X60 149 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 ELP5Q8TE02 316 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 GATAD2BQ8WXI9 593 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 GTPBP3Q969Y2 492 aaKnown RBP11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 HSH2DQ96JZ2 352 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 SSX3Q99909 188 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 WBP1LQ9NX94 342 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 DNAJC27Q9NZQ0 273 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 NFKBIL1Q9UBC1 381 aaPredicted RBP11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 CHST2Q9Y4C5 530 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 PIAS3Q9Y6X2 628 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 PAPPAQ13219 1627 aa11.97□□□□□ -0.49
SLC28A1-203ENST00000394573 TRBV23OR9-2A0A075B6M9 112 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 GSAPA4D1B5 854 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 VPS4BO75351 444 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 RPS25P62851 125 aaKnown RBP11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 JAG1P78504 1218 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 HLXQ14774 488 aaPredicted RBP11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 PON3Q15166 354 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 CRTC2Q53ET0 693 aaPredicted RBP11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 CDPF1Q6NVV7 123 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 LRRN1Q6UXK5 716 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 DEF8Q6ZN54 512 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 CERKQ8TCT0 537 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 SCARB1Q8WTV0 552 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 FATE1Q969F0 183 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 SLC25A28Q96A46 364 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 POM121Q96HA1 1249 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 C12orf42Q96LP6 360 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 MS4A4EQ96PG1 132 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 CDCA4Q9BXL8 241 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 ZNF334Q9HCZ1 680 aaPredicted RBP11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 MED9Q9NWA0 146 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 ASB1Q9Y576 335 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 OR6C74A6NCV1 312 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 IL1AP01583 271 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 TFP02787 698 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 TCRBP04435 133 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 S100A8P05109 93 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 IL6P05231 212 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 SULT1A3P0DMM9 295 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 SULT1A4P0DMN0 295 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 GJA1P17302 382 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 HLA-DPA1P20036 260 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 HSPA7P48741 367 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 EVX1P49640 407 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 SUOXP51687 545 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 RPP30P78346 268 aaKnown RBP11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 TARBP2Q15633 366 aaKnown RBP11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 TMEM44Q2T9K0 475 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 C4orf46Q504U0 113 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 ARHGAP15Q53QZ3 475 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 SWSAP1Q6NVH7 229 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 IL27RAQ6UWB1 636 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 ZNF551Q7Z340 670 aaPredicted RBP11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 DPPA2Q7Z7J5 298 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 DDX53Q86TM3 631 aaKnown RBP11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 NAA40Q86UY6 237 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 CNTN4Q8IWV2 1026 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 NANOGP1Q8N7R0 232 aa11.96□□□□□ -0.49
SLC28A1-203ENST00000394573 UXS1Q8NBZ7 420 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms