RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 ITPAQ9BY32 194 aa13.06□□□□□ -0.32
CCDC142-202ENST00000393965 TRIT1Q9H3H1 467 aaKnown RBP13.06□□□□□ -0.32
CCDC142-202ENST00000393965 SYNPO2LQ9H987 977 aa13.06□□□□□ -0.32
CCDC142-202ENST00000393965 CCDC177Q9NQR7 707 aaPredicted RBP13.06□□□□□ -0.32
CCDC142-202ENST00000393965 UGT2A1Q9Y4X1 527 aa13.06□□□□□ -0.32
CCDC142-202ENST00000393965 DENND4AQ7Z401 1863 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 MDC1Q14676 2089 aaKnown RBP13.05□□□□□ -0.32
CCDC142-202ENST00000393965 EDDM13A0A1B0GTR0 161 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 ANKDD1BA6NHY2 528 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 SLC9A3R1O14745 358 aaPredicted RBP13.05□□□□□ -0.32
CCDC142-202ENST00000393965 KIAA0513O60268 411 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 PRAMEF10O60809 474 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 RECKO95980 971 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 FPR1P21462 350 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 CD83Q01151 205 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 WSCD2Q2TBF2 565 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 C2orf27AQ580R0 203 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 RNASE12Q5GAN4 147 aaKnown RBP13.05□□□□□ -0.32
CCDC142-202ENST00000393965 PSRC1Q6PGN9 363 aaPredicted RBP13.05□□□□□ -0.32
CCDC142-202ENST00000393965 PAQR6Q6TCH4 344 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 VITQ6UXI7 678 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCDC142-202ENST00000393965 KLHDC8AQ8IYD2 350 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 LAS2Q8IYD9 372 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 ALDH16A1Q8IZ83 802 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 MFSD4AQ8N468 514 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 S100ZQ8WXG8 99 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 ARSGQ96EG1 525 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 ZNF717Q9BY31 904 aaPredicted RBP13.05□□□□□ -0.32
CCDC142-202ENST00000393965 CXorf36Q9H7Y0 433 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 IL20RAQ9UHF4 553 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 BTNL2Q9UIR0 455 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 A0A1B0GVC2 190 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 A6NIN4 97 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 IDH3BO43837 385 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 TNFRSF21O75509 655 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 WBP4O75554 376 aaKnown RBP13.05□□□□□ -0.32
CCDC142-202ENST00000393965 KCNK2O95069 426 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 GABARAPO95166 117 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 IFI30P13284 250 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 SEC13P55735 322 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 PRAMEF14Q5SWL7 426 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 PRAMEF13Q5VWM6 474 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 FAM71E1Q6IPT2 247 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 PARP16Q8N5Y8 322 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 AMER2Q8N7J2 671 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 PHF10Q8WUB8 498 aaKnown RBP13.05□□□□□ -0.32
CCDC142-202ENST00000393965 TFGQ92734 400 aaPredicted RBP13.05□□□□□ -0.32
CCDC142-202ENST00000393965 GFM1Q96RP9 751 aaKnown RBP13.05□□□□□ -0.32
CCDC142-202ENST00000393965 FZD3Q9NPG1 666 aa13.05□□□□□ -0.32
CCDC142-202ENST00000393965 ZNF197O14709 1029 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 NARSO43776 548 aaKnown RBP13.04□□□□□ -0.32
CCDC142-202ENST00000393965 LCMT2O60294 686 aaKnown RBP13.04□□□□□ -0.32
CCDC142-202ENST00000393965 PRMT3O60678 531 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 MED26O95402 600 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 PAK4O96013 591 aaPredicted RBP13.04□□□□□ -0.32
CCDC142-202ENST00000393965 IL1RNP18510 177 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 TYW3Q6IPR3 259 aaKnown RBP13.04□□□□□ -0.32
CCDC142-202ENST00000393965 MSANTD1Q6ZTZ1 278 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 CYP4Z2PQ8N1L4 340 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 DEPDC4Q8N2C3 294 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 LINC01555Q8NAE3 123 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 DYNC2LI1Q8TCX1 351 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 TP53INP1Q96A56 240 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 TRNT1Q96Q11 434 aaKnown RBP13.04□□□□□ -0.32
CCDC142-202ENST00000393965 KXD1Q9BQD3 176 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 LHX9Q9NQ69 397 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 PLSCR3Q9NRY6 295 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 CLEC4AQ9UMR7 237 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 KLHL20Q9Y2M5 609 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 A0A1W2PS29 197 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 GSAPA4D1B5 854 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 EFCAB10A6NFE3 127 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 QSOX1O00391 747 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 LINC01565O15544 149 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 PCDH8O95206 1070 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 JUNBP17275 347 aaPredicted RBP13.04□□□□□ -0.32
CCDC142-202ENST00000393965 ITGA1P56199 1179 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 C21orf58P58505 322 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 SNRPNP63162 240 aaKnown RBP13.04□□□□□ -0.32
CCDC142-202ENST00000393965 NXNL2Q5VZ03 156 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 LYSMD2Q8IV50 215 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 METTL4Q8N3J2 472 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 TMIEQ8NEW7 156 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 OR9Q1Q8NGQ5 310 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 CXorf40AQ8TE69 158 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 FBLIM1Q8WUP2 373 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 PPCDCQ96CD2 204 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 MENTQ9BUN1 341 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 PRR14Q9BWN1 585 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 AICDAQ9GZX7 198 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 C1GALT1Q9NS00 363 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 CLEC2DQ9UHP7 191 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 CARNS1A5YM72 827 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 RNASET2O00584 256 aaKnown RBP13.04□□□□□ -0.32
CCDC142-202ENST00000393965 OR10H3O60404 316 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 CCDC159P0C7I6 412 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 ITGAMP11215 1152 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 SCARB2Q14108 478 aa13.04□□□□□ -0.32
CCDC142-202ENST00000393965 DUSP7Q16829 419 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms