RNA–Protein interactions for RNA: ENST00000390488.1

TRAJ49-201, Transcript of T cell receptor alpha joining 49, humanhuman

APPRIS P1 BASIC

Gene TRAJ49, Length 56 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ49-201ENST00000390488 THBS1P07996 1170 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ANXA4P09525 319 aaPredicted RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 PRR23D2P0DMB1 279 aaPredicted RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 HNRNPCL4P0DMR1 293 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 RRASP10301 218 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 HAPLN1P10915 354 aaPredicted RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 APEHP13798 732 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ATP1B2P14415 290 aaPredicted RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ZNF3P17036 446 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 SYN1P17600 705 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 TPH1P17752 444 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ENGP17813 658 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 BMP7P18075 431 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 NPR2P20594 1047 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 DDCP20711 480 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CD247P20963 164 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 TCEA1P23193 301 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 BDNFP23560 247 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 LMO2P25791 158 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 NDUFS1P28331 727 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CD6P30203 668 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 HTR1FP30939 366 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CALCRP30988 508 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 NTSP30990 170 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 LCN1P31025 176 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 HOXA9P31269 272 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 TNFSF8P32971 234 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CHI3L1P36222 383 aaPredicted RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 LIPAP38571 399 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ETV3P41162 512 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ECI1P42126 302 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 RBM34P42696 430 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CCR10P46092 362 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 BRCC3P46736 316 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 RABIFP47224 123 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 EIF1AXP47813 144 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 OR3A3P47888 321 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 MTNR1AP48039 350 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 RFX3P48380 749 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 PITPNBP48739 271 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 MASP1P48740 699 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CLK3P49761 638 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 DAPP51397 102 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ARSDP51689 593 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 KCNQ1P51787 676 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CLCNKAP51800 687 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 XKP51811 444 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 AFF1P51825 1210 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 MAPK12P53778 367 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ATXN1P54253 815 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 FOXA1P55317 472 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 PRMT2P55345 433 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CTBP2P56545 445 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CD81P60033 236 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 DSTNP60981 165 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 UBE2MP61081 183 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 RHOAP61586 193 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 VLDLRP98155 873 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CYCSP99999 105 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 SPIBQ01892 262 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 DSC2Q02487 901 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ZNF91Q05481 1191 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CRYZQ08257 329 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 SREBF2Q12772 1141 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 TWF1Q12792 350 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 HYAL2Q12891 473 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 TSPAN31Q12999 210 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 BIKQ13323 160 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 EIF3IQ13347 325 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 DNASE1L3Q13609 305 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ARHGEF7Q14155 803 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 MRPL58Q14197 206 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 GRB7Q14451 532 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ZNF460Q14592 562 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ABRAXAS2Q15018 415 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 TRAM2Q15035 370 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 RBMS2Q15434 407 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 HMGN3Q15651 99 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CEBPEQ15744 281 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 MAPK14Q16539 360 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 PCSK7Q16549 785 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 BAK1Q16611 211 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 SHROOM1Q2M3G4 852 aaPredicted RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 WSCD2Q2TBF2 565 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CTU2Q2VPK5 515 aaKnown RBP1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 PGS1Q32NB8 556 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 INAVAQ3KP66 663 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 FUT11Q495W5 492 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 SYTL3Q4VX76 610 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 PYCR3Q53H96 274 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 ZNF628Q5EBL2 1059 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 PITRM1Q5JRX3 1037 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 SLC35D3Q5M8T2 416 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 CTSL3PQ5NE16 218 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 C10orf120Q5SQS8 335 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 C6orf183Q5T699 404 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 IDNKQ5T6J7 187 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 FAM72AQ5TYM5 149 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 FAM171A1Q5VUB5 890 aa1.9□□□□□ -2.11
TRAJ49-201ENST00000390488 MFSD14CQ5VZR4 134 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms