RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 PAHP00439 452 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 FGF4P08620 206 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 G6PDP11413 515 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 COL6A1P12109 1028 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 WARSP23381 471 aaKnown RBP5.5□□□□□ -1.53
RFC1-202ENST00000381897 FEN1P39748 380 aaKnown RBP5.5□□□□□ -1.53
RFC1-202ENST00000381897 MAGEA5P43359 124 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 RABIFP47224 123 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 ARCN1P48444 511 aaKnown RBP5.5□□□□□ -1.53
RFC1-202ENST00000381897 MTPNP58546 118 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 SNRPEP62304 92 aaKnown RBP5.5□□□□□ -1.53
RFC1-202ENST00000381897 DSC2Q02487 901 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 PIGFQ07326 219 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 DMWDQ09019 674 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 SPDYE7PQ495Y7 208 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 TRIM61Q5EBN2 209 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 TCTE1Q5JU00 501 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 CES4AQ5XG92 561 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 GDPGP1Q6ZNW5 385 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 FAM20CQ8IXL6 584 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 OR10A6Q8NH74 314 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 DYNC2LI1Q8TCX1 351 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 ZNF675Q8TD23 568 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 ZNF431Q8TF32 576 aaPredicted RBP5.5□□□□□ -1.53
RFC1-202ENST00000381897 SNAPC3Q92966 411 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 NTAN1Q96AB6 310 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 SGK3Q96BR1 496 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 OR52E6Q96RD3 313 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 FCRL5Q96RD9 977 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 CLCC1Q96S66 551 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 HINT2Q9BX68 163 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.5□□□□□ -1.53
RFC1-202ENST00000381897 MINDY3Q9H8M7 445 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.5□□□□□ -1.53
RFC1-202ENST00000381897 GPATCH2Q9NW75 528 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 C1orf109Q9NX04 203 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 MTMR10Q9NXD2 777 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 TJP2Q9UDY2 1190 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 LIPGQ9Y5X9 500 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 BACE2Q9Y5Z0 518 aa5.5□□□□□ -1.53
RFC1-202ENST00000381897 WASH4PA8MWX3 477 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ZNF879B4DU55 563 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 NRP1O14786 923 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CAPN5O15484 640 aaPredicted RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 SCO2O43819 266 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 HCN1O60741 890 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 PRAMEF1O95521 474 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 SYPP08247 313 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CYP3A5P20815 502 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CYP2A7P20853 494 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ARPP19P56211 112 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ST8SIA6P61647 398 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 RHAGQ02094 409 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 PTSQ03393 145 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 TLE4Q04727 773 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 LMAN2Q12907 356 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 DUSP7Q16829 419 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 HSD17B12Q53GQ0 312 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CCNJQ5T5M9 372 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 TIGD3Q6B0B8 471 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 DEF8Q6ZN54 512 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 RASSF6Q6ZTQ3 369 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 MFSD4AQ8N468 514 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 LRRC52Q8N7C0 313 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 PSD4Q8NDX1 1056 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 TRPV1Q8NER1 839 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 BPIFB1Q8TDL5 484 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ASB15Q8WXK1 588 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ACOT12Q8WYK0 555 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 BTF3L4Q96K17 158 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 TTLL2Q9BWV7 592 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CDT1Q9H211 546 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 GORASP2Q9H8Y8 452 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ATP13A2Q9NQ11 1180 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 LIN7CQ9NUP9 197 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 NUDT4Q9NZJ9 180 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CDC42EP3Q9UKI2 254 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 STUB1Q9UNE7 303 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 PLEKHA6Q9Y2H5 1048 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ITGB4P16144 1822 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 OR6C74A6NCV1 312 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 NEMP2A6NFY4 417 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 SPATA31C2B4DYI2 1134 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 F5H697 171 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 SLC16A6O15403 523 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 RPP14O95059 124 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 RETP07949 1114 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ERCC1P07992 297 aaPredicted RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 CAPN3P20807 821 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CXCR2P25025 360 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ADRA1BP35368 520 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 RORAP35398 523 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 CYP4F2P78329 520 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 INCA1Q0VD86 236 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 EIF4HQ15056 248 aaKnown RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 ADPRMQ3LIE5 342 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 PHYHD1Q5SRE7 291 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 ZNF362Q5T0B9 420 aaPredicted RBP5.49□□□□□ -1.53
RFC1-202ENST00000381897 TSTD2Q5T7W7 516 aa5.49□□□□□ -1.53
RFC1-202ENST00000381897 BRAT1Q6PJG6 821 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms