RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 ENKURQ8TC29 256 aa15.83■□□□□ 0.12
PCDHA1-201ENST00000378133 TRMT61AQ96FX7 289 aaKnown RBP15.83■□□□□ 0.12
PCDHA1-201ENST00000378133 DIRAS2Q96HU8 199 aa15.83■□□□□ 0.12
PCDHA1-201ENST00000378133 SLC46A2Q9BY10 475 aa15.83■□□□□ 0.12
PCDHA1-201ENST00000378133 PAK6Q9NQU5 681 aaPredicted RBP15.83■□□□□ 0.12
PCDHA1-201ENST00000378133 SEC14L4Q9UDX3 406 aa15.83■□□□□ 0.12
PCDHA1-201ENST00000378133 CCL26Q9Y258 94 aa15.83■□□□□ 0.12
PCDHA1-201ENST00000378133 ZNF670-ZNF695F2Z2N8 137 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 MTRF1O75570 445 aaKnown RBP15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 C6orf47O95873 294 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 CHMP24386 653 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 HLA-DMAP28067 261 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 PDHA2P29803 388 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 TIA1P31483 386 aaKnown RBP eCLIP15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 CTAG1AP78358 180 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 RHAGQ02094 409 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 CAMKMTQ7Z624 323 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 TMPRSS11BQ86T26 416 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 TRIM69Q86WT6 500 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 PLCZ1Q86YW0 608 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 SLC34A3Q8N130 599 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 RASGEF1AQ8N9B8 481 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 DEFB118Q96PH6 123 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 DHRS9Q9BPW9 319 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 TCF25Q9BQ70 676 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 CLEC2DQ9UHP7 191 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 ACSL6Q9UKU0 697 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 NINQ8N4C6 2090 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 TRAV19A0A0A6YYK7 116 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 IQCMA0A1B0GVH7 501 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 NEDD8-MDP1E9PL57 170 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 WWP2O00308 870 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 RNASET2O00584 256 aaKnown RBP15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 PCDH17O14917 1159 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 MPZL2O60487 215 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 CATP04040 527 aaKnown RBP15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 ZNF8P17098 575 aaPredicted RBP15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 POU1F1P28069 291 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 PBLDP30039 288 aaPredicted RBP15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 CNR2P34972 360 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 ATN1P54259 1190 aaPredicted RBP15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 POM121L1PQ3SYA9 428 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 IFI44LQ53G44 452 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 SPIN4Q56A73 249 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 NFKBIDQ8NI38 313 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 CIDECQ96AQ7 238 aaPredicted RBP15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 METTL2AQ96IZ6 378 aaKnown RBP15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 NECTIN4Q96NY8 510 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 FAM129BQ96TA1 746 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 SLC35A5Q9BS91 424 aa15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 TMEM121BQ9BXQ6 578 aaPredicted RBP15.82■□□□□ 0.12
PCDHA1-201ENST00000378133 A0A1W2PQL4 384 aaPredicted RBP15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 NPC1O15118 1278 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 AP2A2O94973 939 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 GZMKP49863 264 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 SCARB2Q14108 478 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 SPHARQ15513 63 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 PYDC2Q56P42 97 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 IER5LQ5T953 404 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 SAXO2Q658L1 398 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 LIX1LQ8IVB5 337 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 OR5AK3PQ8NH89 298 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 REPS1Q96D71 796 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 IL4I1Q96RQ9 567 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 TMEM245Q9H330 911 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 KLHL21Q9UJP4 597 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 STUB1Q9UNE7 303 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 SSR3Q9UNL2 185 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 MAPRE3Q9UPY8 281 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 AKR7A2O43488 359 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 TNFRSF21O75509 655 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 LEFTY1O75610 366 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 CDRT1O95170 752 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 CXCL10P02778 98 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 TSPAN19P0C672 248 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 ZNF30P17039 623 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 VIPR1P32241 457 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 CSTF2P33240 577 aaKnown RBP eCLIP15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 DGKEP52429 567 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 MADCAM1Q13477 382 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 TMC8Q8IU68 726 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 GDPD1Q8N9F7 314 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 FAM181AQ8N9Y4 354 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 OR56A3Q8NH54 315 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 VPS35Q96QK1 796 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 MAPKAP1Q9BPZ7 522 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 TEKT2Q9UIF3 430 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 HCN4Q9Y3Q4 1203 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 MAP4K5Q9Y4K4 846 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 KCNE2Q9Y6J6 123 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 CCDC88CQ9P219 2028 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 PLA2G10O15496 165 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 CSO75390 466 aaKnown RBP15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 TGFB1P01137 390 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 CPN2P22792 545 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 RECQLP46063 649 aaPredicted RBP15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 SNRPD2P62316 118 aaKnown RBP15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 PCDH1Q08174 1060 aa15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 TARDBPQ13148 414 aaKnown RBP eCLIP15.81■□□□□ 0.12
PCDHA1-201ENST00000378133 ARSIQ5FYB1 569 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms