RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 E7ESA3 106 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 HRKO00198 91 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 FGF17O60258 216 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 SEC31AO94979 1220 aaKnown RBP12.71□□□□□ -0.37
CXCL12-202ENST00000374426 SCELO95171 688 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 HIST1H1TP22492 207 aaPredicted RBP12.71□□□□□ -0.37
CXCL12-202ENST00000374426 MSH2P43246 934 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 IGLV3-21P80748 117 aaPredicted RBP12.71□□□□□ -0.37
CXCL12-202ENST00000374426 POU4F1Q01851 419 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 PDIA2Q13087 525 aaKnown RBP12.71□□□□□ -0.37
CXCL12-202ENST00000374426 E2F2Q14209 437 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 OR4D1Q15615 310 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 RIPPLY2Q5TAB7 128 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 SLC22A10Q63ZE4 541 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 SULT1C3Q6IMI6 304 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 DGAT2L6Q6ZPD8 337 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 SEM1Q6ZVN7 128 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 SYDE1Q6ZW31 735 aaPredicted RBP12.71□□□□□ -0.37
CXCL12-202ENST00000374426 OR4N5Q8IXE1 308 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 SRFBP1Q8NEF9 429 aaKnown RBP12.71□□□□□ -0.37
CXCL12-202ENST00000374426 PAQR8Q8TEZ7 354 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 ZNF473Q8WTR7 871 aaKnown RBP12.71□□□□□ -0.37
CXCL12-202ENST00000374426 GPATCH1Q9BRR8 931 aaKnown RBP12.71□□□□□ -0.37
CXCL12-202ENST00000374426 POLDIP3Q9BY77 421 aaKnown RBP12.71□□□□□ -0.37
CXCL12-202ENST00000374426 EXO5Q9H790 373 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 PROK2Q9HC23 129 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 ST6GALNAC2Q9UJ37 374 aa12.71□□□□□ -0.37
CXCL12-202ENST00000374426 PTBP2Q9UKA9 531 aaKnown RBP12.71□□□□□ -0.37
CXCL12-202ENST00000374426 MTO1Q9Y2Z2 717 aaKnown RBP12.71□□□□□ -0.37
CXCL12-202ENST00000374426 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
CXCL12-202ENST00000374426 LRRC3CA6NJW4 275 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 FAM47E-STBD1D6RA91 191 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 PHGDHO43175 533 aaKnown RBP12.7□□□□□ -0.38
CXCL12-202ENST00000374426 SH3BGRLO75368 114 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 CCDC166P0CW27 439 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 COX7A2P14406 83 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 GABRA1P14867 456 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 CD1DP15813 335 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 HOXB4P17483 251 aaPredicted RBP12.7□□□□□ -0.38
CXCL12-202ENST00000374426 KLK2P20151 261 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 CPN2P22792 545 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 CASP2P42575 452 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 KIR2DL3P43628 341 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 STT3AP46977 705 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 SLC12A2P55011 1212 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 KCNJ2P63252 427 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 DR1Q01658 176 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 IRF8Q02556 426 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 CHIT1Q13231 466 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 LAPTM5Q13571 262 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 CEBPEQ15744 281 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 TBCCQ15814 346 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 TMEM35AQ53FP2 167 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 PAGE2BQ5JRK9 111 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 PRAMEF20Q5VT98 475 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 KLHL7Q8IXQ5 586 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 ULK2Q8IYT8 1036 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 LRRC25Q8N386 305 aaPredicted RBP12.7□□□□□ -0.38
CXCL12-202ENST00000374426 PDPRQ8NCN5 879 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 CHDHQ8NE62 594 aaPredicted RBP12.7□□□□□ -0.38
CXCL12-202ENST00000374426 SLC22A8Q8TCC7 542 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 PPWD1Q96BP3 646 aaKnown RBP12.7□□□□□ -0.38
CXCL12-202ENST00000374426 SPACA9Q96E40 222 aaPredicted RBP12.7□□□□□ -0.38
CXCL12-202ENST00000374426 DGAT2Q96PD7 388 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 SLC6A15Q9H2J7 730 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 CLEC4MQ9H2X3 399 aaPredicted RBP12.7□□□□□ -0.38
CXCL12-202ENST00000374426 ZFP64Q9NPA5 681 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 RASSF1Q9NS23 344 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 TRMT1Q9NXH9 659 aaKnown RBP12.7□□□□□ -0.38
CXCL12-202ENST00000374426 NSMCE4AQ9NXX6 385 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 CD274Q9NZQ7 290 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 CRIM1Q9NZV1 1036 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 B4GALT7Q9UBV7 327 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 PCDHGB3Q9Y5G1 929 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 SPACA6W5XKT8 324 aa12.7□□□□□ -0.38
CXCL12-202ENST00000374426 NINQ8N4C6 2090 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 NCKAP5O14513 1909 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 CXorf49A8MYA2 514 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-202ENST00000374426 SAP18O00422 153 aaKnown RBP12.69□□□□□ -0.38
CXCL12-202ENST00000374426 SYT5O00445 386 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 CCNT2O60583 730 aaKnown RBP12.69□□□□□ -0.38
CXCL12-202ENST00000374426 TGFB1P01137 390 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 SSR2P43308 183 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 ATP6V0D1P61421 351 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 HIST2H2ACQ16777 129 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-202ENST00000374426 AP5B1Q2VPB7 878 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 HIST2H2AA3Q6FI13 130 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 CAPN12Q6ZSI9 719 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 LAS2Q8IYD9 372 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 FBXW8Q8N3Y1 598 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 SLC15A4Q8N697 577 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 RELL2Q8NC24 303 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-202ENST00000374426 NAXEQ8NCW5 288 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 BBOF1Q8ND07 529 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 OR10G3Q8NGC4 313 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 NEIL3Q8TAT5 605 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 FBXL20Q96IG2 436 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 SORBS1Q9BX66 1292 aaKnown RBP12.69□□□□□ -0.38
CXCL12-202ENST00000374426 TRIM31Q9BZY9 425 aa12.69□□□□□ -0.38
CXCL12-202ENST00000374426 PHACTR1Q9C0D0 580 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms