RNA–Protein interactions for RNA: ENST00000374257.5

PTBP3-205, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PTBP3, Length 7,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-205ENST00000374257 NPIPA2E9PIF3 369 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 NPIPA3F8WFD2 350 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 RAD1O60671 282 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 KCNK5O95279 499 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 RENP00797 406 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 XRCC1P18887 633 aaPredicted RBP7.9□□□□□ -1.14
PTBP3-205ENST00000374257 OR4D1Q15615 310 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 EXT1Q16394 746 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 RFX4Q33E94 735 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 SPANXN4Q5MJ08 99 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 ZNF534Q76KX8 674 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 GALNT6Q8NCL4 622 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 FAR1Q8WVX9 515 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 CLK4Q9HAZ1 481 aaKnown RBP7.9□□□□□ -1.14
PTBP3-205ENST00000374257 CUEDC1Q9NWM3 386 aaPredicted RBP7.9□□□□□ -1.14
PTBP3-205ENST00000374257 MMACHCQ9Y4U1 282 aa7.9□□□□□ -1.14
PTBP3-205ENST00000374257 TARM1B6A8C7 271 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 PROM1O43490 865 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 GDF1P27539 372 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 CCL7P80098 99 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 MERTKQ12866 999 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 PTPRRQ15256 657 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 TTC23Q5W5X9 447 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 TCEAL6Q6IPX3 200 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 ZNF440Q8IYI8 595 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 TCEAL3Q969E4 200 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 VIRMAQ69YN4 1812 aaKnown RBP7.9□□□□□ -1.15
PTBP3-205ENST00000374257 MROH6A6NGR9 719 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 MGRN1O60291 552 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 NME6O75414 186 aaPredicted RBP7.9□□□□□ -1.15
PTBP3-205ENST00000374257 GPR75O95800 540 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 HIST1H1TP22492 207 aaPredicted RBP7.9□□□□□ -1.15
PTBP3-205ENST00000374257 HSF2Q03933 536 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 KLC1Q07866 573 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 FZD2Q14332 565 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 RCN1Q15293 331 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 CYP27C1Q4G0S4 372 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 ZNF786Q8N393 782 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 CCL4L1Q8NHW4 92 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 BBS10Q8TAM1 723 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 NSUN5Q96P11 429 aaKnown RBP7.9□□□□□ -1.15
PTBP3-205ENST00000374257 TRIM2Q9C040 744 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 COQ3Q9NZJ6 369 aa7.9□□□□□ -1.15
PTBP3-205ENST00000374257 KRBA1A5PL33 1030 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 TNFRSF11BO00300 401 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 KPNA4O00629 521 aaPredicted RBP7.89□□□□□ -1.15
PTBP3-205ENST00000374257 SLC22A2O15244 555 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 FAM20BO75063 409 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 ALOX12BO75342 701 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 ADARP55265 1226 aaKnown RBP7.89□□□□□ -1.15
PTBP3-205ENST00000374257 RAB38P57729 211 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 TAS2R38P59533 333 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 SRYQ05066 204 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 TOP3AQ13472 1001 aaPredicted RBP7.89□□□□□ -1.15
PTBP3-205ENST00000374257 COL9A2Q14055 689 aaPredicted RBP7.89□□□□□ -1.15
PTBP3-205ENST00000374257 PUM1Q14671 1186 aaKnown RBP eCLIP7.89□□□□□ -1.15
PTBP3-205ENST00000374257 PTGES3Q15185 160 aaKnown RBP7.89□□□□□ -1.15
PTBP3-205ENST00000374257 UNC50Q53HI1 259 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 SFT2D3Q587I9 215 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 CDRT4Q8N9R6 151 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 ELL3Q9HB65 397 aaPredicted RBP7.89□□□□□ -1.15
PTBP3-205ENST00000374257 CTPS2Q9NRF8 586 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 MCTS1Q9ULC4 181 aaKnown RBP7.89□□□□□ -1.15
PTBP3-205ENST00000374257 SLC17A4Q9Y2C5 497 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 E2F3O00716 465 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 VNN2O95498 520 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 SCTRP47872 440 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 SSR4P51571 173 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 DGKQP52824 942 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 MTX3Q5HYI7 312 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 OAFQ86UD1 273 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 FAM217AQ8IXS0 508 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 ALG2Q9H553 416 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 PACSIN3Q9UKS6 424 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 TMEM233B4DJY2 109 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 BCKDHAP12694 445 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 ID4P47928 161 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 CD47Q08722 323 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 UBE2Q1Q7Z7E8 422 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 CGREF1Q99674 301 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 CLN6Q9NWW5 311 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 STMN3Q9NZ72 180 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 PCTPQ9UKL6 214 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 ERVK-19Q9WJR5 959 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 CABIN1Q9Y6J0 2220 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 CLOCKO15516 846 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 SERPINB10P48595 397 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 MRPL49Q13405 166 aaKnown RBP7.89□□□□□ -1.15
PTBP3-205ENST00000374257 DNASE1L3Q13609 305 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 TMEM107Q6UX40 140 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 DHRSXQ8N5I4 330 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 SH3GL3Q99963 347 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 IFT27Q9BW83 186 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 NMUR2Q9GZQ4 415 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 TPRKBQ9Y3C4 175 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 TTC3P53804 2025 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 PATE3B3GLJ2 98 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 CXCR6O00574 342 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 STX11O75558 287 aa7.89□□□□□ -1.15
PTBP3-205ENST00000374257 RPSAP08865 295 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms