RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TBC1D20Q96BZ9 403 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 NXPE2Q96DL1 559 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 PPP1R36Q96LQ0 422 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 FOPNLQ96NB1 174 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 C12orf57Q99622 126 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 EDEM2Q9BV94 578 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 GPR174Q9BXC1 333 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 REG4Q9BYZ8 158 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 PNPOQ9NVS9 261 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 USE1Q9NZ43 259 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 EXTL2Q9UBQ6 330 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 F5P12259 2224 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 CBX4O00257 560 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 RPS2P15880 293 aaKnown RBP6.54□□□□□ -1.36
CSDE1-204ENST00000369530 CSF2RBP32927 897 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 SHMT2P34897 504 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 MEOX2P50222 304 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 RAB13P51153 203 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 CXCR4P61073 352 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 PSME3P61289 254 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 ASAH1Q13510 395 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 TAB1Q15750 504 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 SLC9B1Q4ZJI4 515 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 CRTC2Q53ET0 693 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-204ENST00000369530 STEAP4Q687X5 459 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 ELP2Q6IA86 826 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 TEX261Q6UWH6 196 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 GPR155Q7Z3F1 870 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 THAP5Q7Z6K1 395 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 NAGSQ8N159 534 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 PPHLN1Q8NEY8 458 aaKnown RBP6.54□□□□□ -1.36
CSDE1-204ENST00000369530 HMGCLL1Q8TB92 370 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 EXT2Q93063 718 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 CERS2Q96G23 380 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 UGT2B28Q9BY64 529 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 ABCB10Q9NRK6 738 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 VTI1BQ9UEU0 232 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 AAR2Q9Y312 384 aaKnown RBP6.54□□□□□ -1.36
CSDE1-204ENST00000369530 U3KQ87 197 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 TCRBV5S2A0A599 114 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 LINC00587B1AMM8 73 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 ANKRD66B4E2M5 251 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 E9PQ18 207 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 M0R3G1 203 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 CCL22O00626 93 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 TBX1O43435 398 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 TLX3O43711 291 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 UMPSP11172 480 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 STMN1P16949 149 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 TNNI3P19429 210 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 NCF2P19878 526 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 RYKP34925 604 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 SPRP35270 261 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 CD86P42081 329 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 RABIFP47224 123 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 PPM1JQ5JR12 505 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 SIRPB2Q5JXA9 342 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 C6orf141Q5SZD1 244 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 UTS2BQ765I0 119 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 R3HCC1LQ7Z5L2 792 aaKnown RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 KCNMB4Q86W47 210 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 PTRH1Q86Y79 214 aaKnown RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 TRPV3Q8NET8 790 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 OR1E3Q8WZA6 343 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 SPACA7Q96KW9 195 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 NAT9Q9BTE0 207 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 NRSN2Q9GZP1 204 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 CAB39LQ9H9S4 337 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 ACSS2Q9NR19 701 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 PCDHB16Q9NRJ7 776 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 CYB5R1Q9UHQ9 305 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 ZDBF2Q9HCK1 2354 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 PNMA8CA0A1B0GUJ8 204 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 A0A1W2PQU0 124 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 KRT87PA6NCN2 255 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 IGLON5A6NGN9 336 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 TNFSF14O43557 240 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 TPOP07202 933 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 HBQ1P09105 142 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 HPGDP15428 266 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 TRHRP34981 398 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 MAPK8P45983 427 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 ATP4BP51164 291 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 PGGT1BP53609 377 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 GEMP55040 296 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 CDK3Q00526 305 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 CTBP1Q13363 440 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 CDH18Q13634 790 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 KCNAB1Q14722 419 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF169Q14929 603 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 MAPK11Q15759 364 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 GRK1Q15835 563 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 PTAR1Q7Z6K3 402 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-204ENST00000369530 GATAD2AQ86YP4 633 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 P3H2Q8IVL5 708 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 CHPFQ8IZ52 775 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 HDDC3Q8N4P3 179 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 DMBX1Q8NFW5 382 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 SEC22CQ9BRL7 303 aa6.53□□□□□ -1.36
CSDE1-204ENST00000369530 APOOQ9BUR5 198 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms