RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 TMEM184CQ9NVA4 438 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 ZNF780BQ9Y6R6 833 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 C2orf16Q68DN1 1984 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 LRRK1Q38SD2 2015 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 ZSCAN9O15535 394 aaPredicted RBP13.11□□□□□ -0.31
SHC1-202ENST00000368445 NARSO43776 548 aaKnown RBP13.11□□□□□ -0.31
SHC1-202ENST00000368445 CTSKP43235 329 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 RNF144AP50876 292 aaPredicted RBP13.11□□□□□ -0.31
SHC1-202ENST00000368445 ISL1P61371 349 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 BNIP3Q12983 259 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 TPRG1LQ5T0D9 272 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 SFTPA2Q8IWL1 248 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 SPARTQ8N0X7 666 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 ZNF300Q96RE9 604 aaPredicted RBP13.11□□□□□ -0.31
SHC1-202ENST00000368445 RBM38Q9H0Z9 239 aaKnown RBP13.11□□□□□ -0.31
SHC1-202ENST00000368445 MIR1-1HGQ9H1L0 117 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 NEUROD4Q9HD90 331 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 DOLKQ9UPQ8 538 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 SLC17A4Q9Y2C5 497 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 TNFRSF21O75509 655 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 ATE1O95260 518 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 MATN1P21941 496 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 CLK3P49761 638 aaKnown RBP13.11□□□□□ -0.31
SHC1-202ENST00000368445 ITGA1P56199 1179 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 AP1ARQ63HQ0 302 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 AQP11Q8NBQ7 271 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 TTLQ8NG68 377 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 OR52E4Q8NGH9 312 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 OR2L8Q8NGY9 312 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 ZNF607Q96SK3 696 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 GPR174Q9BXC1 333 aa13.11□□□□□ -0.31
SHC1-202ENST00000368445 A0A1W2PS29 197 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 GPR89AB7ZAQ6 455 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 GUCY1B2O75343 617 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 SERPINB7O75635 380 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 SEMA3DO95025 777 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 BCL10O95999 233 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 GPR89BP0CG08 455 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 HOXB9P17482 250 aaPredicted RBP13.1□□□□□ -0.31
SHC1-202ENST00000368445 CCNA2P20248 432 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 HNRNPA2B1P22626 353 aaKnown RBP13.1□□□□□ -0.31
SHC1-202ENST00000368445 AKT2P31751 481 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 TTKP33981 857 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 RGS1Q08116 209 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 TGM3Q08188 693 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 RBBP4Q09028 425 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 GPR19Q15760 415 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 ZNF793Q6ZN11 406 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 RRM2BQ7LG56 351 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 KRT73Q86Y46 540 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 RBM45Q8IUH3 476 aaKnown RBP13.1□□□□□ -0.31
SHC1-202ENST00000368445 FAM46DQ8NEK8 389 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 ABTB1Q969K4 478 aaPredicted RBP13.1□□□□□ -0.31
SHC1-202ENST00000368445 ALPK1Q96QP1 1244 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 CCDC3Q9BQI4 270 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 YTHDF1Q9BYJ9 559 aaKnown RBP13.1□□□□□ -0.31
SHC1-202ENST00000368445 QRSL1Q9H0R6 528 aaKnown RBP13.1□□□□□ -0.31
SHC1-202ENST00000368445 USE1Q9NZ43 259 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 PSME2Q9UL46 239 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 SNX7Q9UNH6 387 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 IGKV1-8A0A0C4DH67 115 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 TBX6O95947 436 aaPredicted RBP13.1□□□□□ -0.31
SHC1-202ENST00000368445 SLC35G6P0C7Q6 338 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 HOXB6P17509 224 aaKnown RBP13.1□□□□□ -0.31
SHC1-202ENST00000368445 TNNI3P19429 210 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 HIST1H1TP22492 207 aaPredicted RBP13.1□□□□□ -0.31
SHC1-202ENST00000368445 CALRP27797 417 aaKnown RBP13.1□□□□□ -0.31
SHC1-202ENST00000368445 NUP107P57740 925 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 SIM1P81133 766 aaPredicted RBP13.1□□□□□ -0.31
SHC1-202ENST00000368445 SFSWAPQ12872 951 aaKnown RBP13.1□□□□□ -0.31
SHC1-202ENST00000368445 ZNF691Q5VV52 312 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 CAMKMTQ7Z624 323 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 ZNF605Q86T29 641 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 C7orf34Q96L11 122 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 IL4I1Q96RQ9 567 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 SLC6A20Q9NP91 592 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 WASH6PQ9NQA3 447 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 LYVE1Q9Y5Y7 322 aa13.1□□□□□ -0.31
SHC1-202ENST00000368445 CLEC3AO75596 197 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 GCM2O75603 506 aaPredicted RBP13.09□□□□□ -0.31
SHC1-202ENST00000368445 SEMA4FO95754 770 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 CHRM5P08912 532 aaPredicted RBP13.09□□□□□ -0.31
SHC1-202ENST00000368445 PKLRP30613 574 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 STXBP1P61764 594 aaKnown RBP13.09□□□□□ -0.31
SHC1-202ENST00000368445 TOP3AQ13472 1001 aaPredicted RBP13.09□□□□□ -0.31
SHC1-202ENST00000368445 Q6ZS52 159 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 MEX3DQ86XN8 651 aaKnown RBP13.09□□□□□ -0.31
SHC1-202ENST00000368445 ERI1Q8IV48 349 aaKnown RBP13.09□□□□□ -0.31
SHC1-202ENST00000368445 FAM160A2Q8N612 972 aaPredicted RBP13.09□□□□□ -0.31
SHC1-202ENST00000368445 ZNF347Q96SE7 839 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 NIPSNAP1Q9BPW8 284 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 GLIPR2Q9H4G4 154 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 RMI1Q9H9A7 625 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 C11orf16Q9NQ32 467 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 STARD5Q9NSY2 213 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 M0R3G1 203 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 TOR1BO14657 336 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 CCNB2O95067 398 aa13.09□□□□□ -0.31
SHC1-202ENST00000368445 HMGN2P05204 90 aaKnown RBP13.09□□□□□ -0.31
SHC1-202ENST00000368445 IL1RNP18510 177 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms