RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 IL10RBQ08334 325 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 SWI5Q1ZZU3 235 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 RABL3Q5HYI8 236 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 TOR1AIP1Q5JTV8 583 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 CLLU1Q5K131 121 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 PTRHD1Q6GMV3 140 aaKnown RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 LDB1Q86U70 411 aaPredicted RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 SUSD3Q96L08 255 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 ZNF300Q96RE9 604 aaPredicted RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 USE1Q9NZ43 259 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 MLXQ9UH92 298 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 TBC1D24Q9ULP9 559 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 CCL27Q9Y4X3 112 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 KIF26AQ9ULI4 1882 aaPredicted RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 TULP3O75386 442 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 RPP40O75818 363 aaKnown RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 COX5BP10606 129 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 HGFP14210 728 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 S100PP25815 95 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 ALDH3A2P51648 485 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 GABARAPL2P60520 117 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 TM4SF20Q53R12 229 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 RBM48Q5RL73 367 aaKnown RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 SYVN1Q86TM6 617 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 NKAPQ8N5F7 415 aaKnown RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 MAGEE2Q8TD90 523 aaPredicted RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 ELMO1Q92556 727 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 THRSPQ92748 146 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 RPL3LQ92901 407 aaKnown RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 FBRSQ9HAH7 460 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 TRPV4Q9HBA0 871 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 NLE1Q9NVX2 485 aaPredicted RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 THUMPD1Q9NXG2 353 aaKnown RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 SLAMF8Q9P0V8 285 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 FKBP7Q9Y680 259 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 MTCH2Q9Y6C9 303 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 A0A1B0GV90 55 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 FAM234BA2RU67 622 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 CASTOR2A6NHX0 329 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 ZNF99A8MXY4 864 aaPredicted RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 SLC30A4O14863 429 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 SCAMP1O15126 338 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 MT-CO1P00395 513 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 IGHV2-70P01814 119 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 FGF1P05230 155 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 HOXB9P17482 250 aaPredicted RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 TYMPP19971 482 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 HLA-DPA1P20036 260 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 SHMT2P34897 504 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 GPR33Q49SQ1 333 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 PAN3Q58A45 887 aaKnown RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 TPRG1LQ5T0D9 272 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 RAET1GQ6H3X3 334 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 RSPO2Q6UXX9 243 aaPredicted RBP10.35□□□□□ -0.75
SND1-201ENST00000354725 TRILQ7L0X0 811 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 RRM2BQ7LG56 351 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 PLD3Q8IV08 490 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 ZNF558Q96NG5 402 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 LRRC3Q9BY71 257 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 SIK2Q9H0K1 926 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 OR51M1Q9H341 326 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 EXD2Q9NVH0 621 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 ANAPC2Q9UJX6 822 aa10.35□□□□□ -0.75
SND1-201ENST00000354725 TRIOBPQ9H2D6 2365 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 HSBP1L1C9JCN9 74 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 PCDHGA12O60330 932 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 POP7O75817 140 aaKnown RBP10.34□□□□□ -0.75
SND1-201ENST00000354725 CCNB2O95067 398 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 PLATP00750 562 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 SOD2P04179 222 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 KLK3P07288 261 aaPredicted RBP10.34□□□□□ -0.75
SND1-201ENST00000354725 UROSP10746 265 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 PCMT1P22061 227 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 GPX4P36969 197 aaPredicted RBP10.34□□□□□ -0.75
SND1-201ENST00000354725 PREPP48147 710 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 RFX2P48378 723 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 PSPHP78330 225 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 ETFDHQ16134 617 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 HKDC1Q2TB90 917 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 MARC1Q5VT66 337 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 COMTD1Q86VU5 262 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 ZSWIM3Q96MP5 696 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 MBOAT4Q96T53 435 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 FEM1AQ9BSK4 669 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 ING2Q9H160 280 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 PRM3Q9NNZ6 103 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 BABAM2Q9NXR7 383 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 SPG21Q9NZD8 308 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 UXTQ9UBK9 157 aaPredicted RBP10.34□□□□□ -0.75
SND1-201ENST00000354725 SMIM30A4D0T7 59 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 METTL15A6NJ78 407 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 CRTAPO75718 401 aaPredicted RBP10.34□□□□□ -0.75
SND1-201ENST00000354725 RBBP9O75884 186 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 JUNDP17535 347 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 S100A7P31151 101 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 ARSFP54793 590 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 SPCS3P61009 180 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 CYP51A1Q16850 503 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 AAK1Q2M2I8 961 aa10.34□□□□□ -0.75
SND1-201ENST00000354725 Q6ZSR9 355 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms