RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 A0A1W2PPK0 400 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 SMAD6O43541 496 aaKnown RBP15.33■□□□□ 0.04
PTPN11-201ENST00000351677 MTRF1O75570 445 aaKnown RBP15.33■□□□□ 0.04
PTPN11-201ENST00000351677 KAT7O95251 611 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 YES1P07947 543 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 CLCA4Q14CN2 919 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 UGT8Q16880 541 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 OR4N5Q8IXE1 308 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 NRG4Q8WWG1 115 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 KLF15Q9UIH9 416 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 GMEB2Q9UKD1 530 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 DLGAP1O14490 977 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 ZNF208O43345 1280 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 GJB3O75712 270 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 FHP07954 510 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 RHCEP18577 417 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 HOXC12P31275 282 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 ACVR1CQ8NER5 493 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 GATAD2BQ8WXI9 593 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 LGALS12Q96DT0 336 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 FRMD6Q96NE9 622 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 SDR39U1Q9NRG7 319 aaPredicted RBP15.33■□□□□ 0.04
PTPN11-201ENST00000351677 MAU2Q9Y6X3 613 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 ZBTB42B2RXF5 422 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 C9J4A7 227 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 GRIA2P42262 883 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 SOX2P48431 317 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 RAB33AQ14088 237 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 RAB30Q15771 203 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 OR4C11Q6IEV9 310 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 ZNF227Q86WZ6 799 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 NAXEQ8NCW5 288 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 OR2T33Q8NG76 320 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 RHBDF1Q96CC6 855 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 FAM83CQ9BQN1 747 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 SPATA9Q9BWV2 254 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 METTL7AQ9H8H3 244 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 TRPV4Q9HBA0 871 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 SOX1O00570 391 aaPredicted RBP15.32■□□□□ 0.04
PTPN11-201ENST00000351677 RNF13O43567 381 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 PEPDP12955 493 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 MAGEA6P43360 314 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 ZNF542PQ5EBM4 170 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 CATSPEREQ5SY80 951 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 C16orf78Q8WTQ4 265 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 SETD7Q8WTS6 366 aaKnown RBP15.32■□□□□ 0.04
PTPN11-201ENST00000351677 TSACCQ96A04 125 aaPredicted RBP15.32■□□□□ 0.04
PTPN11-201ENST00000351677 SMIM14Q96QK8 99 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 SLC12A9Q9BXP2 914 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 C5AR2Q9P296 337 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 TRAV6A0A075B6T7 132 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 CAPN14A8MX76 684 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 C11orf98E9PRG8 122 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 H0YJX3 145 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 PPP6CO00743 305 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 AHSA1O95433 338 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 SMU1Q2TAY7 513 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 FAM214AQ32MH5 1076 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 PNLDC1Q8NA58 520 aaKnown RBP15.32■□□□□ 0.04
PTPN11-201ENST00000351677 OR52P1PQ8NH57 321 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 NEIL3Q8TAT5 605 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 BADQ92934 168 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 WDR92Q96MX6 357 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 POLDIP3Q9BY77 421 aaKnown RBP15.32■□□□□ 0.04
PTPN11-201ENST00000351677 LINC00597Q9H2U6 94 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 C1orf226A1L170 272 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 MYF6P23409 242 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 TAS2R43P59537 309 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 ZNF551Q7Z340 670 aaPredicted RBP15.32■□□□□ 0.04
PTPN11-201ENST00000351677 COMMD6Q7Z4G1 85 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 PAQR7Q86WK9 346 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 OR6N2Q8NGY6 317 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 PXYLP1Q8TE99 480 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 CCDC107Q8WV48 283 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 SECISBP2Q96T21 854 aaKnown RBP15.32■□□□□ 0.04
PTPN11-201ENST00000351677 MGLLQ99685 303 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 IL17CQ9P0M4 197 aa15.32■□□□□ 0.04
PTPN11-201ENST00000351677 HNRNPA1P09651 372 aaKnown RBP eCLIP15.31■□□□□ 0.04
PTPN11-201ENST00000351677 PMS2P3Q13401 168 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 C22orf42Q6IC83 251 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 ULK3Q6PHR2 472 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 TMED4Q7Z7H5 227 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 AMIGO1Q86WK6 493 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 GOLM1Q8NBJ4 401 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 GPR150Q8NGU9 434 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 FUNDC2Q9BWH2 189 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 GTPBP2Q9BX10 602 aaKnown RBP15.31■□□□□ 0.04
PTPN11-201ENST00000351677 GPR83Q9NYM4 423 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 STOX2Q9P2F5 926 aaPredicted RBP15.31■□□□□ 0.04
PTPN11-201ENST00000351677 UNC119BA6NIH7 251 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 LRIT3Q3SXY7 679 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 SLC39A5Q6ZMH5 540 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 GID4Q8IVV7 300 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 DTWD1Q8N5C7 304 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 SPERTQ8NA61 448 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 SERTAD3Q9UJW9 196 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 CNOT11Q9UKZ1 510 aaKnown RBP15.31■□□□□ 0.04
PTPN11-201ENST00000351677 ZFR2Q9UPR6 939 aaKnown RBP15.31■□□□□ 0.04
PTPN11-201ENST00000351677 FXYD6-FXYD2A0A087WZ82 144 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 GPR39O43194 453 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms