RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TAS2R16Q9NYV7 291 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 COMMD3Q9UBI1 195 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 TINAGQ9UJW2 476 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 ZNF225Q9UK10 706 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 SPATA2Q9UM82 520 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 MGAT4BQ9UQ53 548 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 CRYL1Q9Y2S2 319 aa7.77□□□□□ -1.17
ATG4A-201ENST00000343524 TRAV20A0A0B4J274 112 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 CCL15-CCL14A0A0B4J2E2 113 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 TEX13CA0A0J9YWL9 993 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 NPEPPSL1A6NEC2 478 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 ZAR1LA6NP61 321 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 L7N2F9 121 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 WWP2O00308 870 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 RFXANKO14593 260 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 GPR171O14626 319 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 CASKO14936 926 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 RPP40O75818 363 aaKnown RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 HLA-DQB2P05538 268 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 NMBP08949 121 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 NR2F6P10588 404 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 UBA1P22314 1058 aaKnown RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 SSTR2P30874 369 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 GABRA5P31644 462 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 ACSL1P33121 698 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 BDKRB1P46663 353 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 GDI2P50395 445 aaKnown RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 STC1P52823 247 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 OAZ1P54368 228 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 TSPAN5P62079 268 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 RPS7P62081 194 aaKnown RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 FOXK2Q01167 660 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 MBTD1Q05BQ5 628 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 STX4Q12846 297 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 GPR17Q13304 367 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 PTGR1Q14914 329 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 CCDC85BQ15834 202 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 CCL15Q16663 113 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 RFTN2Q52LD8 501 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 TMEM31Q5JXX7 168 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 METTL11BQ5VVY1 283 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 IL31Q6EBC2 164 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 C22orf42Q6IC83 251 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 C17orf107Q6ZR85 190 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 ZER1Q7Z7L7 766 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 PDZD3Q86UT5 571 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 SLITRK4Q8IW52 837 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 TMEM151BQ8IW70 566 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 C7orf57Q8NEG2 295 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 CELF6Q96J87 481 aaKnown RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 MNTQ99583 582 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 KATNB1Q9BVA0 655 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 TRIM62Q9BVG3 475 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 TMPRSS13Q9BYE2 586 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 ABCG4Q9H172 646 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 MINDY3Q9H8M7 445 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 LRTM1Q9HBL6 345 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 SLC25A19Q9HC21 320 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 DNAJC11Q9NVH1 559 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 KCMF1Q9P0J7 381 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 OR12D3Q9UGF7 316 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 EIF2B4Q9UI10 523 aaKnown RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 DTX4Q9Y2E6 619 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 SLC6A5Q9Y345 797 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 COMMD10Q9Y6G5 202 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 SHROOM3Q8TF72 1996 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 MUC6Q6W4X9 2439 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 IGKV6-21A0A0C4DH24 114 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 PIPSLA2A3N6 862 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 D6RAR5 112 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 ADAM12O43184 909 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 SSNA1O43805 119 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 NBNO60934 754 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 DIRAS1O95057 198 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 RAB36O95755 333 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 CFDP00746 253 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 IGHA2P01877 340 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 APOC3P02656 99 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 ACPPP15309 386 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 ITPKAP23677 461 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 S100PP25815 95 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 HSD17B2P37059 387 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 KCNJ5P48544 419 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 GPR143P51810 404 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 MAZP56270 477 aaKnown RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 CLDN8P56748 225 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 RPS14P62263 151 aaKnown RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 CDH18Q13634 790 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 FGL2Q14314 439 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 NTRK2Q16620 822 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 GTDC1Q4AE62 458 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 SLC39A12Q504Y0 691 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 FAM219BQ5XKK7 198 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 MSANTD2Q6P1R3 559 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 DOK6Q6PKX4 331 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 C17orf99Q6UX52 265 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 LRRC28Q86X40 367 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-201ENST00000343524 KRT78Q8N1N4 520 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 SLC5A8Q8N695 610 aa7.76□□□□□ -1.17
ATG4A-201ENST00000343524 USP7Q93009 1102 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms