RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 PSORS1C1Q9UIG5 152 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 EMCNQ9ULC0 261 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SLCO1B1Q9Y6L6 691 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ASTN1O14525 1302 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ADAMTS12P58397 1594 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 FKTNO75072 461 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 METTL18O95568 372 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 DIRAS3O95661 229 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 CSF2P04141 144 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 HMGB2P26583 209 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 APOBEC3AP31941 199 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MAGEB1P43366 347 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 EMX2Q04743 252 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 GRIN2CQ14957 1233 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 NDUFA9Q16795 377 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 NKAIN1Q4KMZ8 207 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SBK1Q52WX2 424 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PAMR1Q6UXH9 720 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 CLEC14AQ86T13 490 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 LRRTM4Q86VH4 590 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 APCDD1Q8J025 514 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF619Q8N2I2 560 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 HSD17B11Q8NBQ5 300 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PLA2G15Q8NCC3 412 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 OR2T12Q8NG77 320 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 OR5M9Q8NGP3 310 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 STK35Q8TDR2 534 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MALSU1Q96EH3 234 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SENP8Q96LD8 212 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PPP1R36Q96LQ0 422 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ARHGAP39Q9C0H5 1083 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 TGIF2Q9GZN2 237 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 CRISPLD1Q9H336 500 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 TUBA4BQ9H853 241 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 IL1RL2Q9HB29 575 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SLC6A20Q9NP91 592 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 RAB6BQ9NRW1 208 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 APOBEC3BQ9UH17 382 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 FBXL4Q9UKA2 621 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 NDRG4Q9ULP0 352 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SMCO3A2RU48 225 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 POM121BA6NF01 834 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PIK3C2AO00443 1686 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PPP1R2P9O14990 202 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SIGLEC5O15389 551 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ENTPD3O75355 529 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 CBR1P16152 277 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SLC6A2P23975 617 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ITGB7P26010 798 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 RAP1AP62834 184 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 HTRA3P83110 453 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ATP6AP1LQ52LC2 224 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ARSIQ5FYB1 569 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ARL13AQ5H913 290 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ARMCX2Q7L311 632 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 KLBQ86Z14 1044 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 TGIF2LXQ8IUE1 241 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 OR10K1Q8NGX5 313 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 LCN9Q8WX39 176 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 RSC1A1Q92681 617 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 GAL3ST3Q96A11 431 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 LRRC58Q96CX6 371 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MOCOSQ96EN8 888 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 LRR1Q96L50 414 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 VAT1Q99536 393 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 TXN2Q99757 166 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ACBD6Q9BR61 282 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SLC26A1Q9H2B4 701 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SNTG1Q9NSN8 517 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ING1Q9UK53 422 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 NME4O00746 187 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 DLEU1O43261 78 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ATP6AP2O75787 350 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 RPLP1P05386 114 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 LPLP06858 475 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ADH1AP07327 375 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ZSCAN5DPP0CG00 497 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SULT1A3P0DMM9 295 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SULT1A4P0DMN0 295 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 HLA-DPA1P20036 260 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 AKT1P31749 480 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 CDX1P47902 265 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF280AP59817 542 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 SEC61A1P61619 476 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 RANP62826 216 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PWP1Q13610 501 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ECM1Q16610 540 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MPEG1Q2M385 716 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 H3F3CQ6NXT2 135 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 RBM23Q86U06 439 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 CUZD1Q86UP6 607 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 TMEM145Q8NBT3 493 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 GPR26Q8NDV2 337 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 OR2AP1Q8NGE2 309 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 FUBP1Q96AE4 644 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 ACSF2Q96CM8 615 aaPredicted RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 MRPS24Q96EL2 167 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 CPB2Q96IY4 423 aa3.98□□□□□ -1.77
NEDD4-201ENST00000338963 WRAP53Q9BUR4 548 aaKnown RBP3.98□□□□□ -1.77
NEDD4-201ENST00000338963 PLA2G12BQ9BX93 195 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms