RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 ANKMY1Q9P2S6 941 aa15.27■□□□□ 0.03
SYNM-201ENST00000328642 OTOFQ9HC10 1997 aa15.27■□□□□ 0.03
SYNM-201ENST00000328642 SCN2AQ99250 2005 aa15.27■□□□□ 0.03
SYNM-201ENST00000328642 SCN4AP35499 1836 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 MC3RP41968 323 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 MAP4K2Q12851 820 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 NPRL3Q12980 569 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 SUZ12Q15022 739 aaKnown RBP15.26■□□□□ 0.03
SYNM-201ENST00000328642 C5orf22Q49AR2 442 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 PIWIL3Q7Z3Z3 882 aaKnown RBP15.26■□□□□ 0.03
SYNM-201ENST00000328642 NUP43Q8NFH3 380 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 OR51A7Q8NH64 312 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 SGCDQ92629 289 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 MMABQ96EY8 250 aaPredicted RBP15.26■□□□□ 0.03
SYNM-201ENST00000328642 PDXPQ96GD0 296 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 GAL3ST1Q99999 423 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 SNX11Q9Y5W9 270 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 APC2O95996 2303 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 CHURC1-FNTBB4DL54 471 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 DEFA1P59665 94 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 DEFA3P59666 94 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 ZNF630Q2M218 657 aaPredicted RBP15.26■□□□□ 0.03
SYNM-201ENST00000328642 OR4C11Q6IEV9 310 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 OR9A2Q8NGT5 310 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 PHOSPHO2Q8TCD6 241 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 ZNF597Q96LX8 424 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 OR4K3Q96R72 315 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 KRCC1Q9NPI7 259 aaPredicted RBP15.26■□□□□ 0.03
SYNM-201ENST00000328642 MS4A12Q9NXJ0 267 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 APOBEC3BQ9UH17 382 aaKnown RBP15.26■□□□□ 0.03
SYNM-201ENST00000328642 RBBP6Q7Z6E9 1792 aaKnown RBP15.26■□□□□ 0.03
SYNM-201ENST00000328642 TBX1O43435 398 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 HMGN2P05204 90 aaKnown RBP15.26■□□□□ 0.03
SYNM-201ENST00000328642 LCKP06239 509 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 FESP07332 822 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 PABPC4LP0CB38 370 aaKnown RBP15.26■□□□□ 0.03
SYNM-201ENST00000328642 KHKP50053 298 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 LPAL2Q16609 132 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 CHRDL2Q6WN34 429 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 SHISA6Q6ZSJ9 500 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 DCP2Q8IU60 420 aaKnown RBP15.26■□□□□ 0.03
SYNM-201ENST00000328642 ZFP41Q8N8Y5 198 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 DTX3Q8N9I9 347 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 DNAJB8Q8NHS0 232 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 PLGRKTQ9HBL7 147 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 SH2B3Q9UQQ2 575 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 EFCAB9A8MZ26 197 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 ARNTLO00327 626 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 PCYT1AP49585 367 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 IQCCQ4KMZ1 466 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 COQ5Q5HYK3 327 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 EOGTQ5NDL2 527 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 CEP68Q76N32 757 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 UBASH3BQ8TF42 649 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 FAM3CQ92520 227 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 SLC22A18Q96BI1 424 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 TOE1Q96GM8 510 aaKnown RBP15.26■□□□□ 0.03
SYNM-201ENST00000328642 HDHD2Q9H0R4 259 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 GPR83Q9NYM4 423 aa15.26■□□□□ 0.03
SYNM-201ENST00000328642 FAM170BA6NMN3 283 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 CLDN4O14493 209 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 EGFP01133 1207 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 TCF3P15923 654 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 HSD17B2P37059 387 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 RPL6Q02878 288 aaKnown RBP15.25■□□□□ 0.03
SYNM-201ENST00000328642 ST3GAL4Q11206 333 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 ZNF57Q68EA5 555 aaPredicted RBP15.25■□□□□ 0.03
SYNM-201ENST00000328642 ACOT4Q8N9L9 421 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 DEPDC7Q96QD5 511 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 SLC35C2Q9NQQ7 365 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 TDRD6O60522 2096 aaKnown RBP15.25■□□□□ 0.03
SYNM-201ENST00000328642 RTTNQ86VV8 2226 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 GAPDHSO14556 408 aaPredicted RBP15.25■□□□□ 0.03
SYNM-201ENST00000328642 PRAMEF10O60809 474 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 TMCC2O75069 709 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 REM1O75628 298 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 SLCO2B1O94956 709 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 TMED10P49755 219 aaKnown RBP15.25■□□□□ 0.03
SYNM-201ENST00000328642 SKP1P63208 163 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 RGS21Q2M5E4 152 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 PDZK1Q5T2W1 519 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 C18orf63Q68DL7 685 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 OR10H4Q8NGA5 316 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 DTNBP1Q96EV8 351 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 C16orf58Q96GQ5 468 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 PEX11GQ96HA9 241 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 IFT27Q9BW83 186 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 CD207Q9UJ71 328 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 HCN4Q9Y3Q4 1203 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 SPIN1Q9Y657 262 aaPredicted RBP15.25■□□□□ 0.03
SYNM-201ENST00000328642 TLR4O00206 839 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 HCN1O60741 890 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 GAB1Q13480 694 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 ASPGQ86U10 573 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 TMIEQ8NEW7 156 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 Q96MT0 163 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 ZNF347Q96SE7 839 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 PLA2G2FQ9BZM2 168 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 NEUROD4Q9HD90 331 aa15.25■□□□□ 0.03
SYNM-201ENST00000328642 CCNB1IP1Q9NPC3 277 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms