RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 CSKP41240 450 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 LIM2P55344 173 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 CCL23P55773 120 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 AP1S2P56377 157 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 ILKQ13418 452 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 SEC23BQ15437 767 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 CDONQ4KMG0 1287 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 TOR2AQ5JU69 321 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 TMEM201Q5SNT2 666 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 PRSS55Q6UWB4 352 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-202ENST00000321728 ZNF730Q6ZMV8 503 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 RFLNAQ6ZTI6 216 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 DDX53Q86TM3 631 aaKnown RBP17.04■□□□□ 0.32
PRKCB-202ENST00000321728 TMEM161AQ9NX61 479 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 EXO1Q9UQ84 846 aaKnown RBP17.04■□□□□ 0.32
PRKCB-202ENST00000321728 PCDHB7Q9Y5E2 793 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 SCN10AQ9Y5Y9 1956 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 HEPACAM2A8MVW5 462 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 SHOXO15266 292 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 UGDHO60701 494 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 HPGDSO60760 199 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 APOL3O95236 402 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 CPEP16870 476 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 WEE1P30291 646 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 TIA1P31483 386 aaKnown RBP eCLIP17.04■□□□□ 0.322e-6■■■□□ 16.9
PRKCB-202ENST00000321728 PPP3R1P63098 170 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 MC1RQ01726 317 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 UBE3AQ05086 875 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 GPR17Q13304 367 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 NAE1Q13564 534 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 KCNA10Q16322 511 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 SERPINA13PQ6UXR4 307 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 SLC37A3Q8NCC5 494 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 DUSP18Q8NEJ0 188 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 HUS1BQ8NHY5 278 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 PLD4Q96BZ4 506 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 WRAP53Q9BUR4 548 aaKnown RBP17.04■□□□□ 0.32
PRKCB-202ENST00000321728 BHLHE41Q9C0J9 482 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-202ENST00000321728 POLR2J3Q9H1A7 115 aaKnown RBP17.04■□□□□ 0.32
PRKCB-202ENST00000321728 B3GAT2Q9NPZ5 323 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 KLHL42Q9P2K6 505 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 HCN2Q9UL51 889 aa17.04■□□□□ 0.32
PRKCB-202ENST00000321728 TMEM189-UBE2V1I3L0A0 370 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 GFYI3L273 518 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 CASKO14936 926 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 STK19P49842 368 aaPredicted RBP17.03■□□□□ 0.32
PRKCB-202ENST00000321728 CLDN20P56880 219 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 EEF1A2Q05639 463 aaKnown RBP17.03■□□□□ 0.32
PRKCB-202ENST00000321728 CDH18Q13634 790 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 PUM1Q14671 1186 aaKnown RBP eCLIP17.03■□□□□ 0.32
PRKCB-202ENST00000321728 CEACAM20Q6UY09 585 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 TMEM145Q8NBT3 493 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 OR52I1Q8NGK6 324 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 CLP1Q92989 425 aaKnown RBP17.03■□□□□ 0.32
PRKCB-202ENST00000321728 ZC3HAV1LQ96H79 300 aaKnown RBP17.03■□□□□ 0.32
PRKCB-202ENST00000321728 CCDC120Q96HB5 630 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 REEP4Q9H6H4 257 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 ISM1B1AKI9 464 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 KPNA5O15131 536 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 TEX28O15482 410 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 DUSP11O75319 330 aaKnown RBP17.03■□□□□ 0.32
PRKCB-202ENST00000321728 MTX2O75431 263 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 RAB36O95755 333 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 RPS13P62277 151 aaKnown RBP17.03■□□□□ 0.32
PRKCB-202ENST00000321728 ZNF33BQ06732 778 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 IRF5Q13568 498 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 SPIN4Q56A73 249 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 DCST1Q5T197 706 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 OR2G6Q5TZ20 316 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 CBARPQ8N350 705 aaPredicted RBP17.03■□□□□ 0.32
PRKCB-202ENST00000321728 ANKK1Q8NFD2 765 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 RC3H2Q9HBD1 1191 aaKnown RBP17.03■□□□□ 0.32
PRKCB-202ENST00000321728 PAK6Q9NQU5 681 aaPredicted RBP17.03■□□□□ 0.32
PRKCB-202ENST00000321728 B3GNT2Q9NY97 397 aa17.03■□□□□ 0.32
PRKCB-202ENST00000321728 ZNF840PA6NDX5 716 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 H0YIV9 168 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 SLC30A4O14863 429 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 BNIP3LO60238 219 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 SCO1O75880 301 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 RECKO95980 971 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 SP140Q13342 867 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 FLYWCH1Q4VC44 716 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 ZNF57Q68EA5 555 aaPredicted RBP17.02■□□□□ 0.32
PRKCB-202ENST00000321728 C12orf73Q69YU5 71 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 TYW3Q6IPR3 259 aaKnown RBP17.02■□□□□ 0.32
PRKCB-202ENST00000321728 CRTC1Q6UUV9 634 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 TAS1R1Q7RTX1 841 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 TMEM173Q86WV6 379 aaPredicted RBP17.02■□□□□ 0.32
PRKCB-202ENST00000321728 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.02■□□□□ 0.324e-6■■■■■ 36.3
PRKCB-202ENST00000321728 HS6ST3Q8IZP7 471 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 OR7G3Q8NG95 312 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 GATAD2BQ8WXI9 593 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 LINC01599Q8WXQ3 324 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 AKAP1Q92667 903 aaKnown RBP eCLIP17.02■□□□□ 0.32
PRKCB-202ENST00000321728 HYLS1Q96M11 299 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 PPP1R3EQ9H7J1 279 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 BRF2Q9HAW0 419 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 GSTK1Q9Y2Q3 226 aa17.02■□□□□ 0.32
PRKCB-202ENST00000321728 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.02■□□□□ 0.31
PRKCB-202ENST00000321728 AGAP14A8MT82 685 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms