RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 PNMA8CA0A1B0GUJ8 204 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 C5orf58C9J3I9 102 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 B4GALT2O60909 372 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 ENTPD6O75354 484 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 STATHP02808 62 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 SRPRAP08240 638 aaKnown RBP14.39□□□□□ -0.11
CSDC2-201ENST00000306149 CISD3P0C7P0 127 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 EPCAMP16422 314 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 RHCEP18577 417 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 ACADLP28330 430 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 SLC6A11P48066 632 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 HMGA2P52926 109 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 DESI1Q6ICB0 168 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 DEF8Q6ZN54 512 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 SPRED2Q7Z698 418 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 NRSN1Q8IZ57 195 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 ANKRD53Q8N9V6 530 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 EXOSC8Q96B26 276 aaKnown RBP14.39□□□□□ -0.11
CSDC2-201ENST00000306149 HOXD1Q9GZZ0 328 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 SAGE1Q9NXZ1 904 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 CLEC2DQ9UHP7 191 aa14.39□□□□□ -0.11
CSDC2-201ENST00000306149 SH3D21A4FU49 640 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 EFCAB10A6NFE3 127 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 ZAR1LA6NP61 321 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 CTDSP2O14595 271 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 CYP17A1P05093 508 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 CLTBP09497 229 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 UQCRC2P22695 453 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 SOX6P35712 828 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 CASP3P42574 277 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 MAPK12P53778 367 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 HTRA3P83110 453 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 TIMM50Q3ZCQ8 353 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 BCL7AQ4VC05 210 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.38□□□□□ -0.11
CSDC2-201ENST00000306149 UTS2BQ765I0 119 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 FBXO15Q8NCQ5 510 aaPredicted RBP14.38□□□□□ -0.11
CSDC2-201ENST00000306149 OR4D11Q8NGI4 311 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 SLX1AQ9BQ83 275 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 EXOSC4Q9NPD3 245 aaKnown RBP14.38□□□□□ -0.11
CSDC2-201ENST00000306149 KLHL3Q9UH77 587 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 CFL2Q9Y281 166 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 ARRDC5A6NEK1 342 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 ARHGAP33O14559 1287 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 PPM1DO15297 605 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 DYRK3O43781 588 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 PAPLNO95428 1278 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 CEBPBP17676 345 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 RPL3P39023 403 aaKnown RBP14.38□□□□□ -0.11
CSDC2-201ENST00000306149 SOX3P41225 446 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 VIPR2P41587 438 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 DEFA1P59665 94 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 DEFA3P59666 94 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 ZNF770Q6IQ21 691 aaPredicted RBP14.38□□□□□ -0.11
CSDC2-201ENST00000306149 CCDC190Q86UF4 302 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 TRIM43Q96BQ3 446 aaPredicted RBP14.38□□□□□ -0.11
CSDC2-201ENST00000306149 MAPKAP1Q9BPZ7 522 aa14.38□□□□□ -0.11
CSDC2-201ENST00000306149 MOV10Q9HCE1 1003 aaKnown RBP14.38□□□□□ -0.11
CSDC2-201ENST00000306149 LOC110117498-PIK3R3F6TDL0 507 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 H3BN98 237 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 H7BY64 318 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 PI15O43692 258 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 OR10H3O60404 316 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 PIK3CBP42338 1070 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 MAPK9P45984 424 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 LSM11P83369 360 aaKnown RBP eCLIP14.37□□□□□ -0.11
CSDC2-201ENST00000306149 SSX1Q16384 188 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 SPDYE7PQ495Y7 208 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 FNDC3BQ53EP0 1204 aaKnown RBP14.37□□□□□ -0.11
CSDC2-201ENST00000306149 SPANXN2Q5MJ10 180 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 ZNF362Q5T0B9 420 aaPredicted RBP14.37□□□□□ -0.11
CSDC2-201ENST00000306149 LSRQ86X29 649 aaPredicted RBP14.37□□□□□ -0.11
CSDC2-201ENST00000306149 FAM129CQ86XR2 697 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 AMER3Q8N944 861 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 PIK3R3Q92569 461 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 TM4SF18Q96CE8 201 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 PRAP1Q96NZ9 151 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 ZNF717Q9BY31 904 aaPredicted RBP14.37□□□□□ -0.11
CSDC2-201ENST00000306149 ZCCHC2Q9C0B9 1178 aaKnown RBP14.37□□□□□ -0.11
CSDC2-201ENST00000306149 EPHX3Q9H6B9 360 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 CLN6Q9NWW5 311 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 HEATR5BQ9P2D3 2071 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 WWP2O00308 870 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 KMOO15229 486 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 MPZL2O60487 215 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 SERPIND1P05546 499 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 TCTN3Q6NUS6 607 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 SPATC1Q76KD6 591 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 C11orf96Q7Z7L8 435 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 ATCAYQ86WG3 371 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 PDXPQ96GD0 296 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 LRIG1Q96JA1 1093 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 C14orf119Q9NWQ9 140 aa14.37□□□□□ -0.11
CSDC2-201ENST00000306149 OTOL1A6NHN0 477 aaPredicted RBP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 SSX4O60224 188 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 GPX5O75715 221 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 ADH5P11766 374 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 EPHA5P54756 1037 aa14.36□□□□□ -0.11
CSDC2-201ENST00000306149 COL9A2Q14055 689 aaPredicted RBP14.36□□□□□ -0.11
CSDC2-201ENST00000306149 PLAG1Q6DJT9 500 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms