RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 DTD2Q96FN9 168 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 CCM2Q9BSQ5 444 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 PNMA8CA0A1B0GUJ8 204 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 SNTNA6NMZ2 147 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 ZNF780AO75290 641 aaPredicted RBP15.4■□□□□ 0.06
LONRF3-201ENST00000304778 UQCRC1P31930 480 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 PTGS2P35354 604 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 PRLHRP49683 370 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 DGKEP52429 567 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 ERVK-21P61565 698 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 CCSMST1Q4G0I0 132 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 MLIPQ5VWP3 458 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 SLC7A6Q92536 515 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 TMEM159Q96B96 161 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 FEVQ99581 238 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 KCNS3Q9BQ31 491 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 GON7Q9BXV9 100 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 SGK2Q9HBY8 427 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 NDUFAF4Q9P032 175 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 SLC6A14Q9UN76 642 aa15.4■□□□□ 0.06
LONRF3-201ENST00000304778 TNFRSF11BO00300 401 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 QSOX1O00391 747 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 PSIP1O75475 530 aaKnown RBP15.39■□□□□ 0.05
LONRF3-201ENST00000304778 GCM2O75603 506 aaPredicted RBP15.39■□□□□ 0.05
LONRF3-201ENST00000304778 IDSP22304 550 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 SLC19A1P41440 591 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 RFX2P48378 723 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 SELENOWP63302 87 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 POU6F2P78424 691 aaPredicted RBP15.39■□□□□ 0.05
LONRF3-201ENST00000304778 TARDBPQ13148 414 aaKnown RBP eCLIP15.39■□□□□ 0.05
LONRF3-201ENST00000304778 ZNF234Q14588 700 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 IRF3Q14653 427 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 DUSP6Q16828 381 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 ADNP2Q6IQ32 1131 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 AGTRAPQ6RW13 159 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 DNAJC22Q8N4W6 341 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 SPPL2AQ8TCT8 520 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 OR8D1Q8WZ84 308 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 MYDGFQ969H8 173 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 MED8Q96G25 268 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 FAM83CQ9BQN1 747 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 CHCHD6Q9BRQ6 235 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 ZDHHC4Q9NPG8 344 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 TMEM184CQ9NVA4 438 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 STOX2Q9P2F5 926 aaPredicted RBP15.39■□□□□ 0.05
LONRF3-201ENST00000304778 ZNF282Q9UDV7 671 aaPredicted RBP15.39■□□□□ 0.05
LONRF3-201ENST00000304778 EDDM13A0A1B0GTR0 161 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 K7ESM1 405 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 SOD1P00441 154 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 ITGA2P17301 1181 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 ITGB7P26010 798 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 NAE1Q13564 534 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 DOC2BQ14184 412 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 GPAT3Q53EU6 434 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 ARMC4Q5T2S8 1044 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 SYCE2Q6PIF2 218 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 NAGSQ8N159 534 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 TMIEQ8NEW7 156 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 COQ8BQ96D53 544 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 CCDC120Q96HB5 630 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 NECTIN4Q96NY8 510 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 OR4K3Q96R72 315 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 MMP28Q9H239 520 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 COQ3Q9NZJ6 369 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 YBX2Q9Y2T7 364 aaKnown RBP15.39■□□□□ 0.05
LONRF3-201ENST00000304778 SLC5A10A0PJK1 596 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 PCDH7O60245 1069 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 CDK1P06493 297 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 PDHA2P29803 388 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 BDKRB1P46663 353 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 CASP9P55211 416 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 SUZ12Q15022 739 aaKnown RBP15.39■□□□□ 0.05
LONRF3-201ENST00000304778 TIGD6Q17RP2 521 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 SPIN4Q56A73 249 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 OR10G2Q8NGC3 310 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 TRNT1Q96Q11 434 aaKnown RBP15.39■□□□□ 0.05
LONRF3-201ENST00000304778 FAM129BQ96TA1 746 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 SFXN1Q9H9B4 322 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 TEKT2Q9UIF3 430 aa15.39■□□□□ 0.05
LONRF3-201ENST00000304778 MGAT4DA6NG13 374 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 CLCA1A8K7I4 914 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 RNASET2O00584 256 aaKnown RBP15.38■□□□□ 0.05
LONRF3-201ENST00000304778 SHOXO15266 292 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 NOS1APO75052 506 aaPredicted RBP15.38■□□□□ 0.05
LONRF3-201ENST00000304778 SH3BGRLO75368 114 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 NAGAP17050 411 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 CTRB1P17538 263 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 CTRB2Q6GPI1 263 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 KLHDC8AQ8IYD2 350 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 OR4A15Q8NGL6 344 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 CHTF18Q8WVB6 975 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 C2orf16Q68DN1 1984 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 OR6C70A6NIJ9 312 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 MMP20O60882 483 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 TIA1P31483 386 aaKnown RBP eCLIP15.38■□□□□ 0.05
LONRF3-201ENST00000304778 PBX2P40425 430 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 AP2S1P53680 142 aaPredicted RBP15.38■□□□□ 0.05
LONRF3-201ENST00000304778 PCDH1Q08174 1060 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 LRRC74AQ0VAA2 488 aa15.38■□□□□ 0.05
LONRF3-201ENST00000304778 CCDC190Q86UF4 302 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms