RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 PRKYO43930 277 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 PSIP1O75475 530 aaKnown RBP12.88□□□□□ -0.35
CTTN-201ENST00000301843 POP4O95707 220 aaKnown RBP12.88□□□□□ -0.35
CTTN-201ENST00000301843 CTSLP07711 333 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 CRYBB2P43320 205 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 MAPK8P45983 427 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 SNRPD2P62316 118 aaKnown RBP12.88□□□□□ -0.35
CTTN-201ENST00000301843 OLR1P78380 273 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 FLYWCH1Q4VC44 716 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 SPIN4Q56A73 249 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 TPGS2Q68CL5 300 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 TRIM40Q6P9F5 258 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 USP30Q70CQ3 517 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 CPA6Q8N4T0 437 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 GATAD2BQ8WXI9 593 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 AP2M1Q96CW1 435 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 TCEAL4Q96EI5 215 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 F2RL3Q96RI0 385 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 COMMD3Q9UBI1 195 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 KLK4Q9Y5K2 254 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 PCYT1BQ9Y5K3 369 aaPredicted RBP12.88□□□□□ -0.35
CTTN-201ENST00000301843 SPIN1Q9Y657 262 aaPredicted RBP12.88□□□□□ -0.35
CTTN-201ENST00000301843 A0A1W2PQL4 384 aaPredicted RBP12.88□□□□□ -0.35
CTTN-201ENST00000301843 CH25HO95992 272 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 SDC2P34741 201 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 RECQLP46063 649 aaPredicted RBP12.88□□□□□ -0.35
CTTN-201ENST00000301843 XKP51811 444 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 PTPN5P54829 565 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 EEF1A2Q05639 463 aaKnown RBP12.88□□□□□ -0.35
CTTN-201ENST00000301843 GPR50Q13585 617 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 SPDYE7PQ495Y7 208 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 LYPD8Q6UX82 237 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 CCDC80Q76M96 950 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 RAB43Q86YS6 212 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 LAS2Q8IYD9 372 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 FAM46DQ8NEK8 389 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 LILRB4Q8NHJ6 448 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 RACGAP1Q9H0H5 632 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 C11orf54Q9H0W9 315 aaPredicted RBP12.88□□□□□ -0.35
CTTN-201ENST00000301843 POLR2J3Q9H1A7 115 aaKnown RBP12.88□□□□□ -0.35
CTTN-201ENST00000301843 ANKRA2Q9H9E1 313 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 RC3H2Q9HBD1 1191 aaKnown RBP12.88□□□□□ -0.35
CTTN-201ENST00000301843 DMRT3Q9NQL9 472 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 CLCA3PQ9Y6N3 262 aa12.88□□□□□ -0.35
CTTN-201ENST00000301843 HEPACAM2A8MVW5 462 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 CCL16O15467 120 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 GPR37L1O60883 481 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 B4GALT2O60909 372 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 PSMA1P25786 263 aaKnown RBP12.87□□□□□ -0.35
CTTN-201ENST00000301843 PSMB5P28074 263 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 ETV5P41161 510 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 CCR2P41597 374 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 ETV1P50549 477 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 SP140Q13342 867 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 SYPL1Q16563 259 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 PYDC2Q56P42 97 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 CLEC12AQ5QGZ9 265 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 TCTN3Q6NUS6 607 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 ZNF544Q6NX49 715 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 CASP12Q6UXS9 341 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 TP53I13Q8NBR0 393 aaPredicted RBP12.87□□□□□ -0.35
CTTN-201ENST00000301843 C1GALT1C1Q96EU7 318 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 CRELD1Q96HD1 420 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 C19orf43Q9BQ61 176 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 SEMA3GQ9NS98 782 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 SLC25A13Q9UJS0 675 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 ITGB1BP2Q9UKP3 347 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 GPSM3Q9Y4H4 160 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 ZNF106Q9H2Y7 1883 aaKnown RBP12.87□□□□□ -0.35
CTTN-201ENST00000301843 A0A0B4J293 547 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.87□□□□□ -0.35
CTTN-201ENST00000301843 ANHXE9PGG2 379 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 KPNA3O00505 521 aaPredicted RBP12.87□□□□□ -0.35
CTTN-201ENST00000301843 MRPS14O60783 128 aaKnown RBP12.87□□□□□ -0.35
CTTN-201ENST00000301843 PPIBP23284 216 aaKnown RBP12.87□□□□□ -0.35
CTTN-201ENST00000301843 SOX18P35713 384 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 MANFP55145 182 aaKnown RBP12.87□□□□□ -0.35
CTTN-201ENST00000301843 RUNX1T1Q06455 604 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 TCEA2Q15560 299 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 CDKL4Q5MAI5 379 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 TECPR1Q7Z6L1 1165 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 AMER3Q8N944 861 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 SLC7A13Q8TCU3 470 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 XAGE5Q8WWM1 108 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 RNF31Q96EP0 1072 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 HHIPL1Q96JK4 782 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 GPA33Q99795 319 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 TAPBPLQ9BX59 468 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 CDCA4Q9BXL8 241 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 UCK2Q9BZX2 261 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 TMCC3Q9ULS5 477 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 CORO2BQ9UQ03 480 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 A0A1B0GVC2 190 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 A6NIN4 97 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 DVL2O14641 736 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 ZNF197O14709 1029 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 ITGA2P17301 1181 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 HOXB6P17509 224 aaKnown RBP12.87□□□□□ -0.35
CTTN-201ENST00000301843 ZNF284Q2VY69 593 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 MLIPQ5VWP3 458 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms