RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ALDH16A1Q8IZ83 802 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 SEC14L1Q92503 715 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 PIK3R3Q92569 461 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 OR51I1Q9H343 314 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 PRKACGP22612 351 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 FAM78AQ5JUQ0 283 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 FAM26DQ5JW98 314 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 ABHD17BQ5VST6 288 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 OR52P1PQ8NH57 321 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 CAPSLQ8WWF8 208 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 ZNF334Q9HCZ1 680 aaPredicted RBP17.73■□□□□ 0.43
PCDH1-201ENST00000287008 MBD2Q9UBB5 411 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 PTNP21246 168 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 CD38P28907 300 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 RORCP51449 518 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 SLC3A1Q07837 685 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 PTCRAQ6ISU1 281 aaPredicted RBP17.72■□□□□ 0.43
PCDH1-201ENST00000287008 HSD11B1LQ7Z5J1 315 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 TMEM203Q969S6 136 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 ZUFSPQ96AP4 578 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 KCNK13Q9HB14 408 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 LAMP5Q9UJQ1 280 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 DNMT3AQ9Y6K1 912 aaPredicted RBP17.72■□□□□ 0.43
PCDH1-201ENST00000287008 METTL21EPA6NDL7 271 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 FUT4P22083 530 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 GPR143P51810 404 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 MRPL49Q13405 166 aaKnown RBP17.72■□□□□ 0.43
PCDH1-201ENST00000287008 SERTAD2Q14140 314 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 UGT3A2Q3SY77 523 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 FIP1L1Q6UN15 594 aaKnown RBP17.72■□□□□ 0.43
PCDH1-201ENST00000287008 TMPPEQ6ZT21 453 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 USP43Q70EL4 1123 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 ZNF627Q7L945 461 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 TMEM17Q86X19 198 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 MFSD6LQ8IWD5 586 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 OR51A7Q8NH64 312 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 SGCDQ92629 289 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 CRB3Q9BUF7 120 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 ADORA3P0DMS8 318 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 HLA-FP30511 346 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 ZNF84P51523 738 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 PITPNAQ00169 270 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 RAB41Q5JT25 222 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 FAM69BQ5VUD6 431 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 COMMD6Q7Z4G1 85 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 OR56A3Q8NH54 315 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 GNPDA2Q8TDQ7 276 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 THRSPQ92748 146 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 PKP2Q99959 881 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 PREBQ9HCU5 417 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 A0A1B0GVT2 93 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 GPR89AB7ZAQ6 455 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 FAM227AF5H4B4 570 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 GPR89BP0CG08 455 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 MLLT1Q03111 559 aaPredicted RBP17.72■□□□□ 0.43
PCDH1-201ENST00000287008 GINS1Q14691 196 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 RNF220Q5VTB9 566 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 DOK4Q8TEW6 326 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 MALT1Q9UDY8 824 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 NUP98P52948 1817 aa17.72■□□□□ 0.43
PCDH1-201ENST00000287008 HTR1AP08908 422 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 IL4RP24394 825 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 SLC6A11P48066 632 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 RAB2AP61019 212 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 RPS3AP61247 264 aaKnown RBP17.71■□□□□ 0.43
PCDH1-201ENST00000287008 CSTF1Q05048 431 aaKnown RBP17.71■□□□□ 0.43
PCDH1-201ENST00000287008 CDKL4Q5MAI5 379 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 KIAA1614Q5VZ46 1190 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 KCTD18Q6PI47 426 aaPredicted RBP17.71■□□□□ 0.43
PCDH1-201ENST00000287008 FIGNL1Q6PIW4 674 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 TRIM73Q86UV7 250 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 UBQLNLQ8IYU4 475 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 NSMAFQ92636 917 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 PELI2Q9HAT8 420 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 PROM1O43490 865 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 INMTO95050 263 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 HCKP08631 526 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 CD6P30203 668 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 DPP6P42658 865 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 CLRN1P58418 232 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 TAS2R38P59533 333 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 KIR2DS3Q14952 304 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 OR6N2Q8NGY6 317 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 WDR77Q9BQA1 342 aaPredicted RBP17.71■□□□□ 0.43
PCDH1-201ENST00000287008 DOHHQ9BU89 302 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 ACOT7O00154 380 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 SEMA3DO95025 777 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 CDK3Q00526 305 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 LAPTM4AQ15012 233 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 CTC1Q2NKJ3 1217 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 EGFLAMQ63HQ2 1017 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 ARHGAP12Q8IWW6 846 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 ZNF440Q8IYI8 595 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 DUSP23Q9BVJ7 150 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 PCDHB16Q9NRJ7 776 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 PCTPQ9UKL6 214 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 DNAJC15Q9Y5T4 150 aa17.71■□□□□ 0.43
PCDH1-201ENST00000287008 KDM4BO94953 1096 aa17.71■□□□□ 0.42
PCDH1-201ENST00000287008 PGAM2P15259 253 aa17.71■□□□□ 0.42
PCDH1-201ENST00000287008 SIX1Q15475 284 aaPredicted RBP17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms