RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 GDPD1Q8N9F7 314 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 SGCDQ92629 289 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 SCRN2Q96FV2 425 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 TUBB1Q9H4B7 451 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 ZNF385DQ9H6B1 395 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 ABCG2Q9UNQ0 655 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 BOLA1Q9Y3E2 137 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 SPACA6W5XKT8 324 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 TRAV6A0A075B6T7 132 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 SLC16A6O15403 523 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 PDPK1O15530 556 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 GJB3O75712 270 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 BCHEP06276 602 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 PRKACBP22694 351 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 ITGB8P26012 769 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 GDI1P31150 447 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 SMSP52788 366 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 GP2P55259 537 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 MAZP56270 477 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 ISL1P61371 349 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 ADNP2Q6IQ32 1131 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 GHDCQ8N2G8 530 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 ZNF433Q8N7K0 673 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 PIGXQ8TBF5 258 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 CD200R1Q8TD46 325 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 RAB7BQ96AH8 199 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 AHCYL2Q96HN2 611 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 AMBRA1Q9C0C7 1298 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 RC3H2Q9HBD1 1191 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 IL17CQ9P0M4 197 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 A0A1W2PQ09 198 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 C5orf67F2Z3F1 127 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 ARNTP27540 789 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 HNF1BP35680 557 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 PIK3CBP42338 1070 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 EPHA5P54756 1037 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 C9orf64Q5T6V5 341 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 CEACAM20Q6UY09 585 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 TMC8Q8IU68 726 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 FAM20CQ8IXL6 584 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 PLPP6Q8IY26 295 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 C2orf73Q8N5S3 287 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 ZNF655Q8N720 491 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 BEND7Q8N7W2 519 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 GALNT6Q8NCL4 622 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 CYB5D2Q8WUJ1 264 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 HYLS1Q96M11 299 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 SMIM14Q96QK8 99 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 PIP5K1AQ99755 562 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 ENAMQ9NRM1 1142 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 MGAT4BQ9UQ53 548 aa11.03□□□□□ -0.64
CLSTN3-201ENST00000266546 SH3D21A4FU49 640 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 TARM1B6A8C7 271 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 KLHL18O94889 574 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 RAB36O95755 333 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 C6orf47O95873 294 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 GBAP04062 536 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 TCF3P15923 654 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 GGT2P36268 569 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 AQP6Q13520 282 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 DUSP6Q16828 381 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 TMEM44Q2T9K0 475 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 CLECL1Q8IZS7 167 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 FAM86B1Q8N7N1 296 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 OR8J1Q8NGP2 316 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 C19orf43Q9BQ61 176 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 EQTNQ9NQ60 294 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 FBXO8Q9NRD0 319 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 B4GALT6Q9UBX8 382 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 ITM2BQ9Y287 266 aa11.02□□□□□ -0.64
CLSTN3-201ENST00000266546 APOL3O95236 402 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 CHRNB1P11230 501 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 CELP19835 753 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 UQCRC1P31930 480 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 CNR2P34972 360 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 STK19P49842 368 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 ZNF140P52738 457 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 AP3S2P59780 193 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 GDPGP1Q6ZNW5 385 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 RNF130Q86XS8 419 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 GALNT13Q8IUC8 556 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 SLITRK4Q8IW52 837 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 GJD3Q8N144 294 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 NXPE1Q8N323 547 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 OR10H4Q8NGA5 316 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 SLC9A6Q92581 669 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 PIGKQ92643 395 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 MAL2Q969L2 176 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 CCDC115Q96NT0 180 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 MKRN2Q9H000 416 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 GPRC5BQ9NZH0 403 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 EXTL2Q9UBQ6 330 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 RIF1Q5UIP0 2472 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 IFNA16P05015 189 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 ANXA3P12429 323 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 TNFRSF1BP20333 461 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 FAUP35544 74 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 RUNX3Q13761 415 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 Q6ZSR9 355 aa11.02□□□□□ -0.65
CLSTN3-201ENST00000266546 GPR151Q8TDV0 419 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms