RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 OR52P1PQ8NH57 321 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 TOX2Q96NM4 488 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 CSNK1G1Q9HCP0 422 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 SLC15A1P46059 708 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 PON2Q15165 354 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 OR52B6Q8NGF0 335 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 PLOD2O00469 737 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 WDR5P61964 334 aaKnown RBP18.16■□□□□ 0.5
PTPRE-201ENST00000254667 WSCD2Q2TBF2 565 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 MARCH8Q5T0T0 291 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 KDELC1Q6UW63 502 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 B4GALT7Q9UBV7 327 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 MYH1P12882 1939 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 CA3P07451 260 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 PGCP20142 388 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 ITGB7P26010 798 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 OR2B6P58173 313 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 MFSD2AQ8NA29 543 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 SHKBP1Q8TBC3 707 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 SGCDQ92629 289 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 DNMT3AQ9Y6K1 912 aaPredicted RBP18.15■□□□□ 0.5
PTPRE-201ENST00000254667 CLRN1P58418 232 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 C4orf46Q504U0 113 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 ZNF420Q8TAQ5 688 aaPredicted RBP18.15■□□□□ 0.5
PTPRE-201ENST00000254667 TSACCQ96A04 125 aaPredicted RBP18.15■□□□□ 0.5
PTPRE-201ENST00000254667 HSPBAP1Q96EW2 488 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 CPEB1Q9BZB8 566 aaKnown RBP18.15■□□□□ 0.5
PTPRE-201ENST00000254667 IGSF5Q9NSI5 407 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 MED11Q9P086 117 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 HTR3EA5X5Y0 456 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 HOXC13P31276 330 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 NFE2L1Q14494 772 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 ZNF404Q494X3 552 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 FIGLAQ6QHK4 219 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 OR8H1Q8NGG4 311 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 NSMAFQ92636 917 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 DPAGT1Q9H3H5 408 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 RARRES3Q9UL19 164 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 ITGA5P08648 1049 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 HBQ1P09105 142 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 GSTM2P28161 218 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 NUDT1P36639 197 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 TAS2R38P59533 333 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 TMEM225Q6GV28 225 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 SLC22A8Q8TCC7 542 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 FAM3CQ92520 227 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 ENTPD2Q9Y5L3 495 aa18.15■□□□□ 0.5
PTPRE-201ENST00000254667 A0A1B0GVT2 93 aa18.14■□□□□ 0.5
PTPRE-201ENST00000254667 HCKP08631 526 aa18.14■□□□□ 0.5
PTPRE-201ENST00000254667 MAGEA6P43360 314 aa18.14■□□□□ 0.5
PTPRE-201ENST00000254667 CSNK1DP48730 415 aa18.14■□□□□ 0.5
PTPRE-201ENST00000254667 KCNAB2Q13303 367 aa18.14■□□□□ 0.5
PTPRE-201ENST00000254667 TMEM107Q6UX40 140 aa18.14■□□□□ 0.5
PTPRE-201ENST00000254667 LNX2Q8N448 690 aa18.14■□□□□ 0.5
PTPRE-201ENST00000254667 EZH1Q92800 747 aaPredicted RBP18.14■□□□□ 0.5
PTPRE-201ENST00000254667 PPP1R14BQ96C90 147 aa18.14■□□□□ 0.5
PTPRE-201ENST00000254667 ZNF878C9JN71 531 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 KDM4BO94953 1096 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 HHEXQ03014 270 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 CTC1Q2NKJ3 1217 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 CES4AQ5XG92 561 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 GRPEL2Q8TAA5 225 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 S100A16Q96FQ6 103 aaKnown RBP18.14■□□□□ 0.49
PTPRE-201ENST00000254667 PPP4R1LQ9P1A2 415 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 STOX2Q9P2F5 926 aaPredicted RBP18.14■□□□□ 0.49
PTPRE-201ENST00000254667 CA14Q9ULX7 337 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 SPO11Q9Y5K1 396 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 TMEM14AQ9Y6G1 99 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 UBR2Q8IWV8 1755 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 IFNA21P01568 189 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 THEGLP0DJG4 465 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 EPCAMP16422 314 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 ZNF234Q14588 700 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 EXOC3L2Q2M3D2 409 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 DPPA4Q7L190 304 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 OR8J1Q8NGP2 316 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 BMFQ96LC9 184 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 NELL2Q99435 816 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 BOCQ9BWV1 1114 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 IL26Q9NPH9 171 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 PCDHGA10Q9Y5H3 936 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 FEZF1A0PJY2 475 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 H3BSA7 217 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 CDC123O75794 336 aaPredicted RBP18.14■□□□□ 0.49
PTPRE-201ENST00000254667 SH3BP2P78314 561 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 NTHL1P78549 312 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 PLP2Q04941 152 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 SLC35F1Q5T1Q4 408 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 KLHDC8AQ8IYD2 350 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 TIGARQ9NQ88 270 aa18.14■□□□□ 0.49
PTPRE-201ENST00000254667 APOC1P02654 83 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 POU4F2Q12837 409 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 MAD2L1BPQ15013 274 aaPredicted RBP18.13■□□□□ 0.49
PTPRE-201ENST00000254667 RAB41Q5JT25 222 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 PRAMEF17Q5VTA0 474 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 KLHL42Q9P2K6 505 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 C5P01031 1676 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 TEX13CA0A0J9YWL9 993 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 FLRT2O43155 660 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 FESP07332 822 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms