RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SLC9A6Q92581 669 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 REPS1Q96D71 796 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 C1GALT1C1Q96EU7 318 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 GIMAP5Q96F15 307 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 CMTM7Q96FZ5 175 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF416Q9BWM5 594 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 NCKAP1Q9Y2A7 1128 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF175Q9Y473 711 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 PCDHB11Q9Y5F2 797 aa13.52□□□□□ -0.25
PCDHB3-201ENST00000231130 PI15O43692 258 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 KDM4BO94953 1096 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 GASTP01350 101 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 APOC3P02656 99 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 RAF1P04049 648 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 SRCP12931 536 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 CCR7P32248 378 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 WNT3P56703 355 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF772Q68DY9 489 aaPredicted RBP13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 SERPINA13PQ6UXR4 307 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF782Q6ZMW2 699 aaPredicted RBP13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 KRT74Q7RTS7 529 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 TSEN54Q7Z6J9 526 aaKnown RBP13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 IQCF1Q8N6M8 205 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 SYT14Q8NB59 555 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 SRFBP1Q8NEF9 429 aaKnown RBP13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 VPS37AQ8NEZ2 397 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 GPR62Q9BZJ7 368 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 TMCC3Q9ULS5 477 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 PCDHB8Q9UN66 801 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 CKAP5Q14008 2032 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 MYO16Q9Y6X6 1858 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 A0A075B6Q4 140 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 BET1O15155 118 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 TBL1XO60907 577 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 HNF1BP35680 557 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 RPS26P62854 115 aaKnown RBP13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 RNASE12Q5GAN4 147 aaKnown RBP13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 GPRC6AQ5T6X5 926 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 NDUFAF5Q5TEU4 345 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 CERS6Q6ZMG9 384 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 SLC22A8Q8TCC7 542 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 P2RY13Q9BPV8 354 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 VPS29Q9UBQ0 182 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 ADAM30Q9UKF2 790 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 COPS3Q9UNS2 423 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 POFUT2Q9Y2G5 429 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 KLK4Q9Y5K2 254 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 USP34Q70CQ2 3546 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 NUMA1Q14980 2115 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 SYPP08247 313 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 ANXA8P13928 327 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 FOSL1P15407 271 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 CHI3L1P36222 383 aaPredicted RBP13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 SELENOWP63302 87 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 SPHARQ15513 63 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 IFI44LQ53G44 452 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 TIGD3Q6B0B8 471 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 PRSS55Q6UWB4 352 aaPredicted RBP13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 RSPO2Q6UXX9 243 aaPredicted RBP13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 WDR53Q7Z5U6 358 aaPredicted RBP13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF366Q8N895 744 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 FATE1Q969F0 183 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 UPRTQ96BW1 309 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 EPYCQ99645 322 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 HHATLQ9HCP6 504 aa13.51□□□□□ -0.25
PCDHB3-201ENST00000231130 LOC105369274A0A096LPK9 316 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 OR2AG2A6NM03 316 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 OR10H3O60404 316 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 CLDN11O75508 207 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 F11P03951 625 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 IL1RNP18510 177 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 CHMP24386 653 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 NNMTP40261 264 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 ARHGDIBP52566 201 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 PTPN5P54829 565 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 SRSF11Q05519 484 aaKnown RBP13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 MICAQ29983 383 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 OR4N4Q8N0Y3 316 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 TCEANCQ8N8B7 351 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 OR8K5Q8NH50 307 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 GIMAP1Q8WWP7 306 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 OPALINQ96PE5 141 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 HCN3Q9P1Z3 774 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 TNFRSF10DQ9UBN6 386 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 LOC285556D6RIA3 1793 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 ETHE1O95571 254 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 C6orf47O95873 294 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 ACRV1P26436 265 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 GATMP50440 423 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 VSX2P58304 361 aaPredicted RBP13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 DCDC1P59894 354 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 BCL2L1Q07817 233 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 NAE1Q13564 534 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 NCEH1Q6PIU2 408 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 USP30Q70CQ3 517 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 ZNF367Q7RTV3 350 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 KANSL1Q7Z3B3 1105 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 ATCAYQ86WG3 371 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 TRIM69Q86WT6 500 aa13.5□□□□□ -0.25
PCDHB3-201ENST00000231130 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms