RNA–Protein interactions for RNA: ENST00000641733.1

CASC19-255, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,385 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-255	ENST00000641733	PNLDC1	Q8NA58	520 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	PNPT1	Q8TCS8	783 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	DAZL	Q92904	295 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	MAP4K1	Q92918	833 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	OXNAD1	Q96HP4	312 aa	Predicted RBP	5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	GPR137	Q96N19	417 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	PRMT1	Q99873	361 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	EFHD1	Q9BUP0	239 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	GON7	Q9BXV9	100 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	KRTAP4-5	Q9BYR2	181 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	SDCBP2	Q9H190	292 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	GAN	Q9H2C0	597 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	SLITRK6	Q9H5Y7	841 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	XKR8	Q9H6D3	395 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	METTL7A	Q9H8H3	244 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	SYBU	Q9NX95	663 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	RDH8	Q9NYR8	311 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	PCDHA7	Q9UN72	937 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	TMED3	Q9Y3Q3	217 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	SLCO1B1	Q9Y6L6	691 aa		5.72	□□□□□ -1.49
CASC19-255	ENST00000641733	BCOR	Q6W2J9	1755 aa		5.71	□□□□□ -1.49
CASC19-255	ENST00000641733	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	SERTM2	A0A1B0GWG4	89 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	GSAP	A4D1B5	854 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	GAGE12J	A6NER3	117 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	PRR32	B1ATL7	298 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	CHUK	O15111	745 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	SLC22A2	O15244	555 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	HSPA12A	O43301	675 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	ITM2A	O43736	263 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	CLN5	O75503	358 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	STBD1	O95210	358 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	WDPCP	O95876	746 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	RAF1	P04049	648 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	STAG3L3	P0CL85	134 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	RALB	P11234	206 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	CHRNB2	P17787	502 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	ITGB6	P18564	788 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	HOXD10	P28358	340 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	SFTPD	P35247	375 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	GNL1	P36915	607 aa	Predicted RBP	5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	DLST	P36957	453 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	SLC6A8	P48029	635 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	COMP	P49747	757 aa	Predicted RBP	5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	RGS4	P49798	205 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	CCL11	P51671	97 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	PDX1	P52945	283 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	GEM	P55040	296 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	SEC61B	P60468	96 aa	Known RBP	5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	ZBTB17	Q13105	803 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	IL18	Q14116	193 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	GRTP1	Q5TC63	336 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	SUSD4	Q5VX71	490 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	ZNF770	Q6IQ21	691 aa	Predicted RBP	5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	ZNF367	Q7RTV3	350 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	FAM228A	Q86W67	206 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	GRAMD2A	Q8IUY3	354 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	LGI2	Q8N0V4	545 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	PRSS35	Q8N3Z0	413 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	SMYD1	Q8NB12	490 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	COLGALT1	Q8NBJ5	622 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	OR8K3	Q8NH51	312 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	PEX13	Q92968	403 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	HIST1H2AC	Q93077	130 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	C11orf24	Q96F05	449 aa	Predicted RBP	5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	VPS35	Q96QK1	796 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	MTERF1	Q99551	399 aa	Known RBP	5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	BCL7B	Q9BQE9	202 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	SPRTN	Q9H040	489 aa	Predicted RBP	5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	IQCG	Q9H095	443 aa	Known RBP	5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	ZMYND12	Q9H0C1	365 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	RIMS4	Q9H426	269 aa	Predicted RBP	5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	DPEP3	Q9H4B8	488 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	EHD1	Q9H4M9	534 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	MEAF6	Q9HAF1	191 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	C1RL	Q9NZP8	487 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	TNN	Q9UQP3	1299 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	COL4A3	Q01955	1670 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	PAPPA2	Q9BXP8	1791 aa		5.71	□□□□□ -1.5
CASC19-255	ENST00000641733	SMIM22	K7EJ46	135 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	RNASEH1	O60930	286 aa	Known RBP	5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	LRP3	O75074	770 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	PAH	P00439	452 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	SLC2A3	P11169	496 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	DBT	P11182	482 aa	Known RBP	5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	ZNF44	P15621	663 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	CD9	P21926	228 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	JAK1	P23458	1154 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	RPL3	P39023	403 aa	Known RBP	5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	PTGFR	P43088	359 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	ALDH3B1	P43353	468 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	TNFSF10	P50591	281 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	HERV-K104	P63124	156 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	PDE1B	Q01064	536 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	RASGEF1B	Q0VAM2	473 aa		5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	PNRC1	Q12796	327 aa	Predicted RBP	5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	SRSF5	Q13243	272 aa	Known RBP	5.7	□□□□□ -1.5
CASC19-255	ENST00000641733	TRIP10	Q15642	601 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms