RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 WDR41Q9HAD4 459 aa15.66■□□□□ 0.1
UBE3D-208ENST00000626828 ADAP2Q9NPF8 381 aa15.66■□□□□ 0.1
UBE3D-208ENST00000626828 MKS1Q9NXB0 559 aa15.66■□□□□ 0.1
UBE3D-208ENST00000626828 LUZP4Q9P127 313 aa15.66■□□□□ 0.1
UBE3D-208ENST00000626828 ABI3Q9P2A4 366 aa15.66■□□□□ 0.1
UBE3D-208ENST00000626828 PPIEQ9UNP9 301 aaKnown RBP15.66■□□□□ 0.1
UBE3D-208ENST00000626828 ATG4BQ9Y4P1 393 aa15.66■□□□□ 0.1
UBE3D-208ENST00000626828 ASB4Q9Y574 426 aa15.66■□□□□ 0.1
UBE3D-208ENST00000626828 CLCA3PQ9Y6N3 262 aa15.66■□□□□ 0.1
UBE3D-208ENST00000626828 CROCCQ5TZA2 2017 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 A0A0A6YYD5 115 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 TGFBR3LH3BV60 316 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 MANBAO00462 879 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 LDB3O75112 727 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 MYO1DO94832 1006 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 ESRRBO95718 433 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 WDPCPO95876 746 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 HSD3B1P14060 373 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 TNNI3P19429 210 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 HSD3B2P26439 372 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 PPP2R1BP30154 601 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 HMOX2P30519 316 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 CLCN2P51788 898 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 ZNF169Q14929 603 aaPredicted RBP15.65■□□□□ 0.1
UBE3D-208ENST00000626828 ELAVL1Q15717 326 aaKnown RBP15.65■□□□□ 0.1
UBE3D-208ENST00000626828 CUZD1Q86UP6 607 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 RPS19BP1Q86WX3 136 aaKnown RBP15.65■□□□□ 0.1
UBE3D-208ENST00000626828 SRRM1Q8IYB3 904 aaKnown RBP15.65■□□□□ 0.1
UBE3D-208ENST00000626828 LGI4Q8N135 537 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 METTL4Q8N3J2 472 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 GBP7Q8N8V2 638 aaPredicted RBP15.65■□□□□ 0.1
UBE3D-208ENST00000626828 DAZLQ92904 295 aaKnown RBP15.65■□□□□ 0.1
UBE3D-208ENST00000626828 MIB2Q96AX9 1013 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 ANKRD9Q96BM1 317 aaPredicted RBP15.65■□□□□ 0.1
UBE3D-208ENST00000626828 DEFB126Q9BYW3 111 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.65■□□□□ 0.1
UBE3D-208ENST00000626828 C12orf65Q9H3J6 166 aaKnown RBP15.65■□□□□ 0.1
UBE3D-208ENST00000626828 CDCP1Q9H5V8 836 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 MID1IP1Q9NPA3 183 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 FARSBQ9NSD9 589 aaKnown RBP15.65■□□□□ 0.1
UBE3D-208ENST00000626828 VPS29Q9UBQ0 182 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 SLC12A4Q9UP95 1085 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 CSAG2Q9Y5P2 127 aa15.65■□□□□ 0.1
UBE3D-208ENST00000626828 COPG1Q9Y678 874 aaKnown RBP15.65■□□□□ 0.1
UBE3D-208ENST00000626828 TRAV17A0A0B4J275 112 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 ARHGAP10A1A4S6 786 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 TMPRSS11DO60235 418 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 GUCY1B2O75343 617 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 KLK1P06870 262 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 TNFSF10P50591 281 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 GPR143P51810 404 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 HNRNPH2P55795 449 aaKnown RBP15.64■□□□□ 0.09
UBE3D-208ENST00000626828 ASPHQ12797 758 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 CCNYL2Q5T2Q4 361 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 LIPMQ5VYY2 423 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 C18orf63Q68DL7 685 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 FCRLBQ6BAA4 426 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 RPUSD3Q6P087 351 aaKnown RBP15.64■□□□□ 0.09
UBE3D-208ENST00000626828 ATCAYQ86WG3 371 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 CRLF3Q8IUI8 442 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 CISD2Q8N5K1 135 aaKnown RBP15.64■□□□□ 0.09
UBE3D-208ENST00000626828 MORN4Q8NDC4 146 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 SUN3Q8TAQ9 357 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 RBM18Q96H35 190 aaKnown RBP15.64■□□□□ 0.09
UBE3D-208ENST00000626828 APOPT1Q96IL0 206 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 SMC6Q96SB8 1091 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 MRPL1Q9BYD6 325 aaKnown RBP15.64■□□□□ 0.09
UBE3D-208ENST00000626828 PCDHGA10Q9Y5H3 936 aa15.64■□□□□ 0.09
UBE3D-208ENST00000626828 SHANK1Q9Y566 2161 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 CPAMD8Q8IZJ3 1885 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 A0A1W2PR48 441 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 SERTM1A2A2V5 107 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 OR5H15A6NDH6 313 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 PYCARD-AS1I3L0S3 204 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 TRIM13O60858 407 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 VPS4BO75351 444 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 GPR75O95800 540 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 GBAP04062 536 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 IGLV3-21P80748 117 aaPredicted RBP15.63■□□□□ 0.09
UBE3D-208ENST00000626828 TNFRSF17Q02223 184 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 CSTF3Q12996 717 aaKnown RBP15.63■□□□□ 0.09
UBE3D-208ENST00000626828 KRT71Q3SY84 523 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 CROCCP2Q86T23 111 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 HOMEZQ8IX15 550 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 OR4N5Q8IXE1 308 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 APCDD1LQ8NCL9 501 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 OR14A16Q8NHC5 309 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 AGAP11Q8TF27 550 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 PTPMT1Q8WUK0 201 aaPredicted RBP15.63■□□□□ 0.09
UBE3D-208ENST00000626828 SNRNP40Q96DI7 357 aaKnown RBP15.63■□□□□ 0.09
UBE3D-208ENST00000626828 VMP1Q96GC9 406 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 UTP23Q9BRU9 249 aaKnown RBP15.63■□□□□ 0.09
UBE3D-208ENST00000626828 SENP1Q9P0U3 644 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 MAP10Q9P2G4 905 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 VPS4AQ9UN37 437 aa15.63■□□□□ 0.09
UBE3D-208ENST00000626828 MYOCOSA0A1B0GUC4 107 aa15.62■□□□□ 0.09
UBE3D-208ENST00000626828 UBFD1O14562 309 aaKnown RBP15.62■□□□□ 0.09
UBE3D-208ENST00000626828 RGS16O15492 202 aaPredicted RBP15.62■□□□□ 0.09
UBE3D-208ENST00000626828 FGF17O60258 216 aa15.62■□□□□ 0.09
UBE3D-208ENST00000626828 ZFAND5O76080 213 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms