RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 TRAV19A0A0A6YYK7 116 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 A0A0G2JN53 185 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 FABP12A6NFH5 140 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 NEDD8-MDP1E9PL57 170 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 CATP04040 527 aaKnown RBP15.03■□□□□ -0
NPHP4-211ENST00000622020 FURINP09958 794 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 SELPP16109 830 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 PTNP21246 168 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 CRYBB2P43320 205 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 RAB25P57735 213 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 ARPC4P59998 168 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 NFE2L1Q14494 772 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 CCDC85BQ15834 202 aaPredicted RBP15.03■□□□□ -0
NPHP4-211ENST00000622020 SPIN4Q56A73 249 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 C16orf78Q8WTQ4 265 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 C1GALT1C1Q96EU7 318 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 CITED4Q96RK1 184 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 C11orf54Q9H0W9 315 aaPredicted RBP15.03■□□□□ -0
NPHP4-211ENST00000622020 COMMD3Q9UBI1 195 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 TMCC3Q9ULS5 477 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 PRKAB1Q9Y478 270 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 PCM1Q15154 2024 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 ZNF197O14709 1029 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 SCG5P05408 212 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 GSTM1P09488 218 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 PDZK1Q5T2W1 519 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 GAREM2Q75VX8 874 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 TMEM25Q86YD3 366 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 CADM2Q8N3J6 435 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 KLHL6Q8WZ60 621 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 CCDC32Q9BV29 185 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 TAPBPLQ9BX59 468 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 CXorf36Q9H7Y0 433 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 CCL26Q9Y258 94 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 GPR52Q9Y2T5 361 aa15.02■□□□□ -0
NPHP4-211ENST00000622020 SPIN1Q9Y657 262 aaPredicted RBP15.02■□□□□ -0
NPHP4-211ENST00000622020 A0A1W2PQ45 241 aaPredicted RBP15.02□□□□□ -0.01
NPHP4-211ENST00000622020 A0A1W2PQY0 241 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 WASHC1A8K0Z3 465 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 EIF3FO00303 357 aaPredicted RBP15.02□□□□□ -0.01
NPHP4-211ENST00000622020 MYL12BO14950 172 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 CPNE3O75131 537 aaKnown RBP15.02□□□□□ -0.01
NPHP4-211ENST00000622020 TSPAN19P0C672 248 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 SDC2P34741 201 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 XKP51811 444 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 SNRPD2P62316 118 aaKnown RBP15.02□□□□□ -0.01
NPHP4-211ENST00000622020 ZNF91Q05481 1191 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 ATAT1Q5SQI0 421 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 LYPD8Q6UX82 237 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 WASH2PQ6VEQ5 465 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 Q6ZNB5 142 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 SLCO4C1Q6ZQN7 724 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 HORMAD2Q8N7B1 307 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 FLCNQ8NFG4 579 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 SLC6A18Q96N87 628 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 LYSMD1Q96S90 227 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 MAPKAP1Q9BPZ7 522 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 PRR14Q9BWN1 585 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 POLR2J3Q9H1A7 115 aaKnown RBP15.02□□□□□ -0.01
NPHP4-211ENST00000622020 MVB12BQ9H7P6 319 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 STOML2Q9UJZ1 356 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 GPSM3Q9Y4H4 160 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 CLCA3PQ9Y6N3 262 aa15.02□□□□□ -0.01
NPHP4-211ENST00000622020 FAM172BPA6NC97 362 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 CCDC182A6NF36 153 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 SMLR1H3BR10 107 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 RGS13O14921 159 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 STATHP02808 62 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 DSTNP60981 165 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 SP140Q13342 867 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 ARSIQ5FYB1 569 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 C7orf57Q8NEG2 295 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 C9orf43Q8TAL5 461 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-211ENST00000622020 GATAD2BQ8WXI9 593 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 TMEM80Q96HE8 168 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 UCK2Q9BZX2 261 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 SSR3Q9UNL2 185 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 CMAHPQ9Y471 501 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 MYO10Q9HD67 2058 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 LEFTY1O75610 366 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 EPHB3P54753 998 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 PTPN5P54829 565 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 PSPHP78330 225 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 CDK10Q15131 360 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 TYW3Q6IPR3 259 aaKnown RBP15.01□□□□□ -0.01
NPHP4-211ENST00000622020 C11orf96Q7Z7L8 435 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 LAS2Q8IYD9 372 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 OXR1Q8N573 874 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 OR4D11Q8NGI4 311 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 SLC38A5Q8WUX1 472 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 UCN3Q969E3 161 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 IGSF21Q96ID5 467 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 SRRQ9GZT4 340 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 THSD1Q9NS62 852 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 ANGPT4Q9Y264 503 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 HELZP42694 1942 aaKnown RBP15.01□□□□□ -0.01
NPHP4-211ENST00000622020 OR6C70A6NIJ9 312 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 PRKYO43930 277 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 GPR37L1O60883 481 aa15.01□□□□□ -0.01
NPHP4-211ENST00000622020 SLCO2B1O94956 709 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms