RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CDNFQ49AH0 187 aa12.18□□□□□ -0.46
TCF4-248ENST00000616053 CLK4Q9HAZ1 481 aaKnown RBP12.18□□□□□ -0.46
TCF4-248ENST00000616053 TAS2R10Q9NYW0 307 aa12.18□□□□□ -0.46
TCF4-248ENST00000616053 KLRG2A4D1S0 409 aaPredicted RBP12.17□□□□□ -0.46
TCF4-248ENST00000616053 AIREO43918 545 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 UGDHO60701 494 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 MTX2O75431 263 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 GOT2P00505 430 aaKnown RBP12.17□□□□□ -0.46
TCF4-248ENST00000616053 PBX3P40426 434 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 TAF1AQ15573 450 aaPredicted RBP12.17□□□□□ -0.46
TCF4-248ENST00000616053 TREML2Q5T2D2 321 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 SPPL2CQ8IUH8 684 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 FAM160A2Q8N612 972 aaPredicted RBP12.17□□□□□ -0.46
TCF4-248ENST00000616053 SLC2A12Q8TD20 617 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 FBXL18Q96ME1 805 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 PECRQ9BY49 303 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 NEO1Q92859 1461 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 UPK3BL1B0FP48 263 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 UPK3BL2E5RIL1 263 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 HTR3BO95264 441 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 ZNF14P17017 642 aaPredicted RBP12.17□□□□□ -0.46
TCF4-248ENST00000616053 PTPRRQ15256 657 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 WDR6Q9NNW5 1121 aaKnown RBP12.17□□□□□ -0.46
TCF4-248ENST00000616053 EURLQ9NYK6 297 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 GJD2Q9UKL4 321 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 EMC9Q9Y3B6 208 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 CASC3O15234 703 aaKnown RBP12.17□□□□□ -0.46
TCF4-248ENST00000616053 THBS3P49746 956 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 PPP2CAP67775 309 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 AKR1C8PQ5T2L2 129 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 PEX13Q92968 403 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 SECISBP2Q96T21 854 aaKnown RBP12.17□□□□□ -0.46
TCF4-248ENST00000616053 CD248Q9HCU0 757 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 MS4A12Q9NXJ0 267 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 HS3ST4Q9Y661 456 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 RBM47A0AV96 593 aaKnown RBP12.17□□□□□ -0.46
TCF4-248ENST00000616053 EML1O00423 815 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 EDN3P14138 238 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 CAPSQ13938 189 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 SPIN4Q56A73 249 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 SMYD5Q6GMV2 418 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 OTOP1Q7RTM1 612 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 KCNK18Q7Z418 384 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 MAP4K3Q8IVH8 894 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 CYP2W1Q8TAV3 490 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 TNFRSF25Q93038 417 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 CYP2S1Q96SQ9 504 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 HRASLSQ9HDD0 168 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 ACSL6Q9UKU0 697 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 FAM170BA6NMN3 283 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 TPOP07202 933 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 SOX2P48431 317 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 MOGQ16653 247 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 BCL2L15Q5TBC7 163 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 ZCCHC9Q8N567 271 aaKnown RBP12.17□□□□□ -0.46
TCF4-248ENST00000616053 OR5B2Q96R09 309 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 SYT3Q9BQG1 590 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 SYT17Q9BSW7 474 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 SARDHQ9UL12 918 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 A0A1W2PP55 124 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 SAGE2PA6NJ88 616 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 TSTD3H0UI37 97 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 BIDP55957 195 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 SLC46A3Q7Z3Q1 461 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 ZNF695Q8IW36 515 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 CCDC71LQ8N9Z2 235 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 FANK1Q8TC84 345 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 IL1F10Q8WWZ1 152 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 YIPF1Q9Y548 306 aa12.17□□□□□ -0.46
TCF4-248ENST00000616053 EI24O14681 340 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 MYCLP1P12525 358 aaPredicted RBP12.16□□□□□ -0.46
TCF4-248ENST00000616053 CLCQ05315 142 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 MARCH9Q86YJ5 346 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 OR1S1Q8NH92 325 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 RHOJQ9H4E5 214 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 NINJ2Q9NZG7 142 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 WDR45Q9Y484 360 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 AGAP5A6NIR3 686 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 ANKRD63C9JTQ0 380 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 LY86O95711 162 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 UGT1A4P22310 534 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 HOXA4Q00056 320 aaPredicted RBP12.16□□□□□ -0.46
TCF4-248ENST00000616053 UBAP2LQ14157 1087 aaKnown RBP12.16□□□□□ -0.46
TCF4-248ENST00000616053 MCATQ8IVS2 390 aaKnown RBP12.16□□□□□ -0.46
TCF4-248ENST00000616053 TMIEQ8NEW7 156 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 BBS1Q8NFJ9 593 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 LCORQ96JN0 433 aaPredicted RBP12.16□□□□□ -0.46
TCF4-248ENST00000616053 KCTD7Q96MP8 289 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 AGAP2Q99490 1192 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 FUOMA2VDF0 154 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 C2orf78A6NCI8 922 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 CEBPZOSA8MTT3 80 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 SLITRK3O94933 977 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 IFI30P13284 250 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 ZNF616Q08AN1 781 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 AUHQ13825 339 aaKnown RBP12.16□□□□□ -0.46
TCF4-248ENST00000616053 OR10A6Q8NH74 314 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 ACMSDQ8TDX5 336 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 IRGQQ8WZA9 623 aa12.16□□□□□ -0.46
TCF4-248ENST00000616053 TRIB1Q96RU8 372 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms