RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 TRMT11Q7Z4G4 463 aaKnown RBP14.01□□□□□ -0.17
CDH1-213ENST00000612417 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.01□□□□□ -0.17
CDH1-213ENST00000612417 IQCF2Q8IXL9 164 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 CFAP206Q8IYR0 622 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 NFKBIDQ8NI38 313 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 SLC5A11Q8WWX8 675 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 GEMIN6Q8WXD5 167 aaKnown RBP14.01□□□□□ -0.17
CDH1-213ENST00000612417 LINC00615Q96LM1 132 aaPredicted RBP14.01□□□□□ -0.17
CDH1-213ENST00000612417 UBE2ZQ9H832 354 aaPredicted RBP14.01□□□□□ -0.17
CDH1-213ENST00000612417 SPASTQ9UBP0 616 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 COLQQ9Y215 455 aaPredicted RBP14.01□□□□□ -0.17
CDH1-213ENST00000612417 ZNF451Q9Y4E5 1061 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 VIPP01282 170 aa14□□□□□ -0.17
CDH1-213ENST00000612417 IFNA14P01570 189 aa14□□□□□ -0.17
CDH1-213ENST00000612417 OPN1SWP03999 348 aa14□□□□□ -0.17
CDH1-213ENST00000612417 ARAFP10398 606 aa14□□□□□ -0.17
CDH1-213ENST00000612417 COL9A1P20849 921 aa14□□□□□ -0.17
CDH1-213ENST00000612417 XCR1P46094 333 aa14□□□□□ -0.17
CDH1-213ENST00000612417 CDK6Q00534 326 aa14□□□□□ -0.17
CDH1-213ENST00000612417 SPIBQ01892 262 aa14□□□□□ -0.17
CDH1-213ENST00000612417 SGCGQ13326 291 aa14□□□□□ -0.17
CDH1-213ENST00000612417 INAQ16352 499 aa14□□□□□ -0.17
CDH1-213ENST00000612417 IER5LQ5T953 404 aa14□□□□□ -0.17
CDH1-213ENST00000612417 NXPE4Q6UWF7 544 aa14□□□□□ -0.17
CDH1-213ENST00000612417 Q6ZPB1 254 aaPredicted RBP14□□□□□ -0.17
CDH1-213ENST00000612417 HEATR4Q86WZ0 1026 aa14□□□□□ -0.17
CDH1-213ENST00000612417 CCDC103Q8IW40 242 aa14□□□□□ -0.17
CDH1-213ENST00000612417 SLC30A8Q8IWU4 369 aa14□□□□□ -0.17
CDH1-213ENST00000612417 LGI4Q8N135 537 aa14□□□□□ -0.17
CDH1-213ENST00000612417 DEPDC4Q8N2C3 294 aa14□□□□□ -0.17
CDH1-213ENST00000612417 WDR48Q8TAF3 677 aa14□□□□□ -0.17
CDH1-213ENST00000612417 RPL3LQ92901 407 aaKnown RBP14□□□□□ -0.17
CDH1-213ENST00000612417 UBE2E3Q969T4 207 aa14□□□□□ -0.17
CDH1-213ENST00000612417 CIDECQ96AQ7 238 aaPredicted RBP14□□□□□ -0.17
CDH1-213ENST00000612417 ITPKCQ96DU7 683 aa14□□□□□ -0.17
CDH1-213ENST00000612417 ZHX1-C8orf76Q96EF9 292 aa14□□□□□ -0.17
CDH1-213ENST00000612417 DOLKQ9UPQ8 538 aa14□□□□□ -0.17
CDH1-213ENST00000612417 C17orf113A0A1B0GUU1 675 aa14□□□□□ -0.17
CDH1-213ENST00000612417 ARRDC5A6NEK1 342 aa14□□□□□ -0.17
CDH1-213ENST00000612417 SERPINB7O75635 380 aa14□□□□□ -0.17
CDH1-213ENST00000612417 KRT75O95678 551 aa14□□□□□ -0.17
CDH1-213ENST00000612417 PAK4O96013 591 aaPredicted RBP14□□□□□ -0.17
CDH1-213ENST00000612417 ALOX5P09917 674 aa14□□□□□ -0.17
CDH1-213ENST00000612417 LIPAP38571 399 aa14□□□□□ -0.17
CDH1-213ENST00000612417 PRIM2P49643 509 aa14□□□□□ -0.17
CDH1-213ENST00000612417 CDH12P55289 794 aa14□□□□□ -0.17
CDH1-213ENST00000612417 IFITM3Q01628 133 aa14□□□□□ -0.17
CDH1-213ENST00000612417 MC1RQ01726 317 aa14□□□□□ -0.17
CDH1-213ENST00000612417 C2orf80Q0P641 193 aa14□□□□□ -0.17
CDH1-213ENST00000612417 SLC5A12Q1EHB4 618 aa14□□□□□ -0.17
CDH1-213ENST00000612417 EXOC3L2Q2M3D2 409 aa14□□□□□ -0.17
CDH1-213ENST00000612417 WSCD2Q2TBF2 565 aa14□□□□□ -0.17
CDH1-213ENST00000612417 TMEM236Q5W0B7 351 aa14□□□□□ -0.17
CDH1-213ENST00000612417 ADAMTSL4Q6UY14 1074 aa14□□□□□ -0.17
CDH1-213ENST00000612417 ZNF605Q86T29 641 aa14□□□□□ -0.17
CDH1-213ENST00000612417 ARMC8Q8IUR7 673 aa14□□□□□ -0.17
CDH1-213ENST00000612417 PLD3Q8IV08 490 aa14□□□□□ -0.17
CDH1-213ENST00000612417 ZNF514Q96K75 400 aaPredicted RBP14□□□□□ -0.17
CDH1-213ENST00000612417 DHRS1Q96LJ7 313 aa14□□□□□ -0.17
CDH1-213ENST00000612417 OR51B5Q9H339 312 aa14□□□□□ -0.17
CDH1-213ENST00000612417 DPEP2Q9H4A9 486 aa14□□□□□ -0.17
CDH1-213ENST00000612417 PRM3Q9NNZ6 103 aa14□□□□□ -0.17
CDH1-213ENST00000612417 RLIMQ9NVW2 624 aa14□□□□□ -0.17
CDH1-213ENST00000612417 ENOPH1Q9UHY7 261 aa14□□□□□ -0.17
CDH1-213ENST00000612417 ICKQ9UPZ9 632 aa14□□□□□ -0.17
CDH1-213ENST00000612417 A3GALT2U3KPV4 340 aa14□□□□□ -0.17
CDH1-213ENST00000612417 PLXND1Q9Y4D7 1925 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 A0A1W2PQF6 199 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 M0R082 166 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 NARSO43776 548 aaKnown RBP13.99□□□□□ -0.17
CDH1-213ENST00000612417 VEGFDO43915 354 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 TGFB1P01137 390 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 GBAP04062 536 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 TNFRSF1BP20333 461 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 C21orf33P30042 268 aaPredicted RBP13.99□□□□□ -0.17
CDH1-213ENST00000612417 SLC19A1P41440 591 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 OR1E2P47887 323 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 TAS2R50P59544 299 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 RPS21P63220 83 aaKnown RBP13.99□□□□□ -0.17
CDH1-213ENST00000612417 FBXO43Q4G163 708 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 RNF130Q86XS8 419 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 SETD7Q8WTS6 366 aaKnown RBP13.99□□□□□ -0.17
CDH1-213ENST00000612417 GGHQ92820 318 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 PIP5K1AQ99755 562 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 NIPSNAP1Q9BPW8 284 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 SPNS1Q9H2V7 528 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 DSN1Q9H410 356 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 FBRSQ9HAH7 460 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 CCDC177Q9NQR7 707 aaPredicted RBP13.99□□□□□ -0.17
CDH1-213ENST00000612417 PRKAB1Q9Y478 270 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 TBC1D3DA0A087WVF3 549 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 TBC1D3IA0A087WXS9 549 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 TBC1D3EA0A087X179 549 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 TBC1D3KA0A087X1G2 549 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 KRBA1A5PL33 1030 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 TBC1D3FA6NER0 549 aaPredicted RBP13.99□□□□□ -0.17
CDH1-213ENST00000612417 TBC1D3LB9A6J9 549 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 POP7O75817 140 aaKnown RBP13.99□□□□□ -0.17
CDH1-213ENST00000612417 TBC1D3HP0C7X1 549 aa13.99□□□□□ -0.17
CDH1-213ENST00000612417 CD72P21854 359 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms