RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CMTM7Q96FZ5 175 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 LURAP1Q96LR2 239 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 RASL10BQ96S79 203 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 PHACTR1Q9C0D0 580 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 OR8D2Q9GZM6 311 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 DEFB127Q9H1M4 99 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 OR51B5Q9H339 312 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 NMRAL1Q9HBL8 299 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 IGSF5Q9NSI5 407 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 NUDT4Q9NZJ9 180 aa7.07□□□□□ -1.28
CUX1-219ENST00000606749 SUPT3HB4E1H0 165 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 K7EPI3 171 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 UBXN8O00124 270 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 SAP18O00422 153 aaKnown RBP7.06□□□□□ -1.28
CUX1-219ENST00000606749 ZNF354AO60765 605 aaPredicted RBP7.06□□□□□ -1.28
CUX1-219ENST00000606749 KERAO60938 352 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 SUPT3HO75486 399 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 GLSO94925 669 aaPredicted RBP7.06□□□□□ -1.28
CUX1-219ENST00000606749 SCELO95171 688 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 EPB42P16452 691 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 POU3F2P20265 443 aaPredicted RBP7.06□□□□□ -1.28
CUX1-219ENST00000606749 CPN2P22792 545 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 SERPINB1P30740 379 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 SSTR2P30874 369 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 CASQ1P31415 396 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 STX2P32856 288 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 PIK3CBP42338 1070 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 IGLV3-21P80748 117 aaPredicted RBP7.06□□□□□ -1.28
CUX1-219ENST00000606749 PLGLB1Q02325 96 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 PIGGQ5H8A4 983 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 EMC4Q5J8M3 183 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 KHDRBS2Q5VWX1 349 aaKnown RBP7.06□□□□□ -1.28
CUX1-219ENST00000606749 TMEM211Q6ICI0 200 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 GRHL2Q6ISB3 625 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 ARHGAP11AQ6P4F7 1023 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 PAOXQ6QHF9 649 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 ZDHHC24Q6UX98 284 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 RTL4Q6ZR62 310 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 RGS9BPQ6ZS82 235 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 CEP128Q6ZU80 1094 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 TBC1D1Q86TI0 1168 aaPredicted RBP7.06□□□□□ -1.28
CUX1-219ENST00000606749 CD163Q86VB7 1156 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 CCDC25Q86WR0 208 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 OR4N5Q8IXE1 308 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 TEX9Q8N6V9 391 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 ACBD4Q8NC06 268 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 C7orf57Q8NEG2 295 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 OR5L2Q8NGL0 311 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 LILRB4Q8NHJ6 448 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 HUS1BQ8NHY5 278 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 SLC2A12Q8TD20 617 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 UBTD2Q8WUN7 234 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 ANP32BQ92688 251 aaKnown RBP7.06□□□□□ -1.28
CUX1-219ENST00000606749 RBM18Q96H35 190 aaKnown RBP7.06□□□□□ -1.28
CUX1-219ENST00000606749 SENP5Q96HI0 755 aaPredicted RBP7.06□□□□□ -1.28
CUX1-219ENST00000606749 SCYL1Q96KG9 808 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 SGCZQ96LD1 299 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 SPOCK3Q9BQ16 436 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 FAM173AQ9BQD7 235 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 SORBS1Q9BX66 1292 aaKnown RBP7.06□□□□□ -1.28
CUX1-219ENST00000606749 ENKD1Q9H0I2 346 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 RAB17Q9H0T7 212 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 ZDHHC11Q9H8X9 412 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 MS4A12Q9NXJ0 267 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 COQ3Q9NZJ6 369 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 OPTCQ9UBM4 332 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 ADGRE2Q9UHX3 823 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 ACOT9Q9Y305 439 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 SPACA6W5XKT8 324 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 PDZD2O15018 2839 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 PKDREJQ9NTG1 2253 aa7.06□□□□□ -1.28
CUX1-219ENST00000606749 MYO9AB2RTY4 2548 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 A0A087X1B8 175 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 A0A0G2JMM0 328 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 A0A1B0GVC2 190 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 A0A1W2PPB8 328 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 A0A1W2PRS3 328 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 CCDC189A1A4V9 331 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 HMX2A2RU54 273 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 WASHC1A8K0Z3 465 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 SYCE1LA8MT33 242 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 FAM166BA8MTA8 275 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 KIR3DP1A8MWS1 328 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 G3V3Y1 287 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 PROM1O43490 865 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 FGF17O60258 216 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 C2P06681 752 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 PTX3P26022 381 aaPredicted RBP7.05□□□□□ -1.28
CUX1-219ENST00000606749 SSR2P43308 183 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 STT3AP46977 705 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 ALDH18A1P54886 795 aaKnown RBP7.05□□□□□ -1.28
CUX1-219ENST00000606749 KRTAP10-9P60411 292 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 ETF1P62495 437 aaKnown RBP7.05□□□□□ -1.28
CUX1-219ENST00000606749 IRF9Q00978 393 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 PMPCAQ10713 525 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 FOXO1Q12778 655 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 ASPHQ12797 758 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 BIKQ13323 160 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 NAB1Q13506 487 aa7.05□□□□□ -1.28
CUX1-219ENST00000606749 SLMAPQ14BN4 828 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms