RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	FFAR1	O14842	300 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	C1QB	P02746	253 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	IGFBP1	P08833	259 aa	Predicted RBP	15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	ARAF	P10398	606 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	PKLR	P30613	574 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	PRKCZ	Q05513	592 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	C22orf42	Q6IC83	251 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	KIAA1841	Q6NSI8	718 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	RETSAT	Q6NUM9	610 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	FAM92B	Q6ZTR7	304 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	RASGRP3	Q8IV61	690 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	IL17RC	Q8NAC3	791 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	TP53I13	Q8NBR0	393 aa	Predicted RBP	15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	BHMT	Q93088	406 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	NELL2	Q99435	816 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	RC3H2	Q9HBD1	1191 aa	Known RBP	15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	ANGPT4	Q9Y264	503 aa		15.83	■□□□□ 0.12
CAPN12-211	ENST00000601685	SOX14	O95416	240 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	PRKAR2A	P13861	404 aa	Known RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	SSTR4	P31391	388 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	MAP2K3	P46734	347 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	SLC5A12	Q1EHB4	618 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	ZNF628	Q5EBL2	1059 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	SERPINA13P	Q6UXR4	307 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	TPRG1	Q6ZUI0	275 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	OR7G3	Q8NG95	312 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	OR5H6	Q8NGV6	325 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	HUS1B	Q8NHY5	278 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	CLIP3	Q96DZ5	547 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	ZC3HAV1L	Q96H79	300 aa	Known RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	WRAP53	Q9BUR4	548 aa	Known RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	MKRN2	Q9H000	416 aa	Known RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	TMPRSS11E	Q9UL52	423 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	ALG5	Q9Y673	324 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	HEPACAM2	A8MVW5	462 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685		H7C4K7	107 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	CPE	P16870	476 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	IRS1	P35568	1242 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	LIM2	P55344	173 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	CDH18	Q13634	790 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	PUM1	Q14671	1186 aa	Known RBP eCLIP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	CASP12	Q6UXS9	341 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	BCDIN3D	Q7Z5W3	292 aa	Known RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	OR8J1	Q8NGP2	316 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	CIDEC	Q96AQ7	238 aa	Predicted RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	SAMD11	Q96NU1	681 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	CASD1	Q96PB1	797 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	OR4K3	Q96R72	315 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	PKP4	Q99569	1192 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	MED18	Q9BUE0	208 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	TRAF4	Q9BUZ4	470 aa	Predicted RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	PRM3	Q9NNZ6	103 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	TMCC3	Q9ULS5	477 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	NDRG2	Q9UN36	371 aa	Known RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	LOC105371267	A0A1B0GV96	52 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	C12orf71	A8MTZ7	269 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	PROM1	O43490	865 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	HCN1	O60741	890 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	GPR37L1	O60883	481 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	HLA-DQB1	P01920	261 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	ATP1B2	P14415	290 aa	Predicted RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	ELN	P15502	786 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	CST5	P28325	142 aa	Predicted RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	CHI3L1	P36222	383 aa	Predicted RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	ACLY	P53396	1101 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	RPS13	P62277	151 aa	Known RBP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	PTS	Q03393	145 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	TARDBP	Q13148	414 aa	Known RBP eCLIP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	NAE1	Q13564	534 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	OCLN	Q16625	522 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	USP30	Q70CQ3	517 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	ZNF767P	Q75MW2	155 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	TCEANC	Q8N8B7	351 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	ATP6V1C2	Q8NEY4	427 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	OR5AK3P	Q8NH89	298 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	ANKRA2	Q9H9E1	313 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	TRPM5	Q9NZQ8	1165 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	HCN2	Q9UL51	889 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	MGAT4B	Q9UQ53	548 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	PCDHB7	Q9Y5E2	793 aa		15.82	■□□□□ 0.12
CAPN12-211	ENST00000601685	AGRP	O00253	132 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	SRPRA	P08240	638 aa	Known RBP	15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	HMGA1	P17096	107 aa	Known RBP	15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	SERPINA4	P29622	427 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	IFNA8	P32881	189 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	SDC2	P34741	201 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	CA8	P35219	290 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	GSTM5	P46439	218 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	XK	P51811	444 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	ZNF763	Q0D2J5	394 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	MPEG1	Q2M385	716 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	BTBD16	Q32M84	506 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	CEACAM20	Q6UY09	585 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	DPY19L3	Q6ZPD9	716 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	CCDC28A	Q8IWP9	274 aa		15.81	■□□□□ 0.12
CAPN12-211	ENST00000601685	DUSP18	Q8NEJ0	188 aa		15.81	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms