RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 LAMP1P11279 417 aa20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 RAB38P57729 211 aa20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 MAT1AQ00266 395 aaKnown RBP20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 EIF3IQ13347 325 aaKnown RBP20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 ZNF385BQ569K4 471 aa20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 PMEPA1Q969W9 287 aa20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 ZNF764Q96H86 408 aaPredicted RBP20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 THTPAQ9BU02 230 aa20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 NDE1Q9NXR1 346 aa20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 EHD3Q9NZN3 535 aa20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 C5AR2Q9P296 337 aa20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 SPACA6W5XKT8 324 aa20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 FER1L5A0AVI2 2057 aa20.82■□□□□ 0.92
SNRNP70-209ENST00000601065 KNTC1P50748 2209 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 CCDC187A0A096LP49 1063 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 GLOD5A6NK44 160 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 CYR61O00622 381 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 NTRK1P04629 796 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 PGM1P36871 562 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 ETV5P41161 510 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 OR1D4P47884 311 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 SHC2P98077 582 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 PLIN5Q00G26 463 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 SYT16Q17RD7 645 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 PRSS53Q2L4Q9 553 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 C1orf189Q5VU69 101 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 OR4F3Q6IEY1 312 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 FAM47BQ8NA70 645 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 RNF31Q96EP0 1072 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 DUSP26Q9BV47 211 aa20.81■□□□□ 0.92
SNRNP70-209ENST00000601065 A0A1W2PNU3 283 aaPredicted RBP20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 PGRMC2O15173 223 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 HBQ1P09105 142 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 TLX1P31314 330 aaPredicted RBP20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 RAB15P59190 212 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 NFYCQ13952 458 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 MAPKAPK3Q16644 382 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 HACD2Q6Y1H2 254 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 PGAM4Q8N0Y7 254 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 CACTIN-AS1Q8N1I8 211 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 ROPN1LQ96C74 230 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 CLIP3Q96DZ5 547 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 GBP5Q96PP8 586 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 RAB3IPQ96QF0 476 aaPredicted RBP20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 BHLHE41Q9C0J9 482 aaPredicted RBP20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 RPF2Q9H7B2 306 aaKnown RBP20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 ZNF304Q9HCX3 659 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 ATAD3AQ9NVI7 634 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 TAS2R7Q9NYW3 318 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 CES1P1Q9UKY3 287 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 PMS2P1A4D2B8 440 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 WASHC1A8K0Z3 465 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 PLD2O14939 933 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 KCNK5O95279 499 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 JMJD7P0C870 316 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 RNH1P13489 461 aaKnown RBP20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 WNT3P56703 355 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 DSG2Q14126 1118 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 MPEG1Q2M385 716 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 SLC48A1Q6P1K1 146 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 CEACAM20Q6UY09 585 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 OR51Q1Q8NH59 317 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 PEX11GQ96HA9 241 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 CLPTM1LQ96KA5 538 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 SLC39A3Q9BRY0 314 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 PRDM9Q9NQV7 894 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 GID8Q9NWU2 228 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 SLAMF8Q9P0V8 285 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 CROTQ9UKG9 612 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 MAP4K5Q9Y4K4 846 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 PCDHGA7Q9Y5G6 932 aa20.8■□□□□ 0.92
SNRNP70-209ENST00000601065 FAM227AF5H4B4 570 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 SCN2BO60939 215 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 CPNE3O75131 537 aaKnown RBP20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 MAPK10P53779 464 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 PSME3P61289 254 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 DCAF12Q5T6F0 453 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 FAM180BQ6P0A1 224 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 TMPRSS12Q86WS5 348 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 DPP10Q8N608 796 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 TMEM52Q8NDY8 209 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 DNAJB14Q8TBM8 379 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 ADAMTS18Q8TE60 1221 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 GTF2H4Q92759 462 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 COL26A1Q96A83 441 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 FAM120CQ9NX05 1096 aaKnown RBP20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 PISDQ9UG56 409 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 UTS2RQ9UKP6 389 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 B3GALT1Q9Y5Z6 326 aa20.79■□□□□ 0.92
SNRNP70-209ENST00000601065 NUP214P35658 2090 aaPredicted RBP20.78■□□□□ 0.92
SNRNP70-209ENST00000601065 ZNF28P17035 718 aa20.78■□□□□ 0.92
SNRNP70-209ENST00000601065 HNRNPFP52597 415 aaKnown RBP20.78■□□□□ 0.92
SNRNP70-209ENST00000601065 TARDBPQ13148 414 aaKnown RBP eCLIP20.78■□□□□ 0.922e-8■□□□□ 10.8
SNRNP70-209ENST00000601065 CAPRIN1Q14444 709 aaKnown RBP20.78■□□□□ 0.92
SNRNP70-209ENST00000601065 TRMT5Q32P41 509 aaKnown RBP20.78■□□□□ 0.92
SNRNP70-209ENST00000601065 ZNF385CQ66K41 422 aaPredicted RBP20.78■□□□□ 0.92
SNRNP70-209ENST00000601065 MSANTD1Q6ZTZ1 278 aa20.78■□□□□ 0.92
SNRNP70-209ENST00000601065 ANKRD46Q86W74 232 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms