RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 CDH13P55290 713 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 PER3P56645 1201 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 FCRLBQ6BAA4 426 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 CRLF3Q8IUI8 442 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 LGI4Q8N135 537 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 B3GNT7Q8NFL0 401 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 MYRIPQ8NFW9 859 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 EPS8L3Q8TE67 593 aaKnown RBP23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 ADAP2Q9NPF8 381 aa23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 LYARQ9NX58 379 aaKnown RBP23.22■■□□□ 1.31
CDC42EP4-205ENST00000580315 CROCCQ5TZA2 2017 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 F10P00742 488 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 IFNA16P05015 189 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 IMPDH1P20839 514 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 TLX1P31314 330 aaPredicted RBP23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 CLCQ05315 142 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 SERTAD2Q14140 314 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 ZNF678Q5SXM1 525 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 RPUSD3Q6P087 351 aaKnown RBP23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 EMBQ6PCB8 327 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 CYP20A1Q6UW02 462 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 RPS27LQ71UM5 84 aaKnown RBP23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 GPR180Q86V85 440 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 NUDT13Q86X67 352 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 SRRM1Q8IYB3 904 aaKnown RBP23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 BEST3Q8N1M1 668 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 TMEM132CQ8N3T6 1108 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 NFAM1Q8NET5 270 aaPredicted RBP23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 TRPC4APQ8TEL6 797 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 CCDC126Q96EE4 140 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 SNX6Q9UNH7 406 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 STK38LQ9Y2H1 464 aa23.21■■□□□ 1.31
CDC42EP4-205ENST00000580315 TGFBR3LH3BV60 316 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 SEMA3DO95025 777 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 TSPAN8P19075 237 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 BUD31P41223 144 aaPredicted RBP23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 PRKAA2P54646 552 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 ELAVL1Q15717 326 aaKnown RBP23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 WDR93Q6P2C0 686 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 RPS19BP1Q86WX3 136 aaKnown RBP23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 KIF2BQ8N4N8 673 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 TMEM237Q96Q45 408 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 UTP23Q9BRU9 249 aaKnown RBP23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 ALOXE3Q9BYJ1 711 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 DEFB126Q9BYW3 111 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 AHSPQ9NZD4 102 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 TRPS1Q9UHF7 1281 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 GRID1Q9ULK0 1009 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 CLDN16Q9Y5I7 305 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 CLCA3PQ9Y6N3 262 aa23.2■■□□□ 1.3
CDC42EP4-205ENST00000580315 CDK2AP1O14519 115 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 ZG16O60844 167 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 ETHE1O95571 254 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 MLYCDO95822 493 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 PPP2R1BP30154 601 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 BSGP35613 385 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 CLCN2P51788 898 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 CCDC153Q494R4 210 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 UNC50Q53HI1 259 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 SGO1Q5FBB7 561 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 FAM180AQ6UWF9 173 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 DAZLQ92904 295 aaKnown RBP23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 VMP1Q96GC9 406 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 SLX1AQ9BQ83 275 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 CDCP1Q9H5V8 836 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 RPF2Q9H7B2 306 aaKnown RBP23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 DDX31Q9H8H2 851 aaKnown RBP23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 ENTPD4Q9Y227 616 aa23.19■■□□□ 1.3
CDC42EP4-205ENST00000580315 SVILO95425 2214 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 APCP25054 2843 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 TLDC2A0PJX2 215 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 PPP6CO00743 305 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 COPEO14579 308 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 HNRNPRO43390 633 aaKnown RBP23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 PRAMEF2O60811 474 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 LDB3O75112 727 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 STSP08842 583 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 NUDT17P0C025 328 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 MYL2P10916 166 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 TNNI3P19429 210 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 TNFRSF17Q02223 184 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 IFFO1Q0D2I5 559 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 BIKQ13323 160 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 INAQ16352 499 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 LETMD1Q6P1Q0 360 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 SH2D5Q6ZV89 423 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 RIBC1Q8N443 379 aaPredicted RBP23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 OR14A16Q8NHC5 309 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 AENQ8WTP8 325 aaKnown RBP23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 SELENOMQ8WWX9 145 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 TANKQ92844 425 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 L3HYPDHQ96EM0 354 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 ZNF382Q96SR6 550 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 ZNF717Q9BY31 904 aaPredicted RBP23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 WDR41Q9HAD4 459 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 NMRK1Q9NWW6 199 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 VTI1BQ9UEU0 232 aa23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 PPIEQ9UNP9 301 aaKnown RBP23.18■■□□□ 1.3
CDC42EP4-205ENST00000580315 V9GYY5 206 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms