RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 TWF1Q12792 350 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 IL18Q14116 193 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 AANATQ16613 207 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 CRB2Q5IJ48 1285 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 ZNF772Q68DY9 489 aaPredicted RBP16.05■□□□□ 0.16
LITAF-209ENST00000571688 TMEM107Q6UX40 140 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 ANGPTL8Q6UXH0 198 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 BCDIN3DQ7Z5W3 292 aaKnown RBP16.05■□□□□ 0.16
LITAF-209ENST00000571688 COMMD7Q86VX2 200 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.05■□□□□ 0.16
LITAF-209ENST00000571688 GPALPP1Q8IXQ4 340 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 TIGD4Q8IY51 512 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 ADGRG2Q8IZP9 1017 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 ZNF366Q8N895 744 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 OR4A15Q8NGL6 344 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 SLC28A3Q9HAS3 691 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 PCDH10Q9P2E7 1040 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 KCND3Q9UK17 655 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 HCN2Q9UL51 889 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 MGAT4AQ9UM21 535 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 PCDHB9Q9Y5E1 797 aa16.05■□□□□ 0.16
LITAF-209ENST00000571688 SPIN1Q9Y657 262 aaPredicted RBP16.05■□□□□ 0.16
LITAF-209ENST00000571688 IGFBP1P08833 259 aaPredicted RBP16.04■□□□□ 0.16
LITAF-209ENST00000571688 CBSLP0DN79 551 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 ITGALP20701 1170 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 CBSP35520 551 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 MRPS6P82932 125 aaKnown RBP16.04■□□□□ 0.16
LITAF-209ENST00000571688 EEF1A2Q05639 463 aaKnown RBP16.04■□□□□ 0.16
LITAF-209ENST00000571688 FOXD4Q12950 439 aaPredicted RBP16.04■□□□□ 0.16
LITAF-209ENST00000571688 TUSC3Q13454 348 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 KCNC3Q14003 757 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 FCN2Q15485 313 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 OCLNQ16625 522 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 ATAT1Q5SQI0 421 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 LAPTM4BQ86VI4 370 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 TAGAPQ8N103 731 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 OR8J1Q8NGP2 316 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 TM9SF4Q92544 642 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 UCN3Q969E3 161 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 FUBP3Q96I24 572 aaKnown RBP eCLIP16.04■□□□□ 0.16
LITAF-209ENST00000571688 KCTD5Q9NXV2 234 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 AFF4Q9UHB7 1163 aaKnown RBP16.04■□□□□ 0.16
LITAF-209ENST00000571688 CBX4O00257 560 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 SOX14O95416 240 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 ATF4P18848 351 aaPredicted RBP16.04■□□□□ 0.16
LITAF-209ENST00000571688 IDSP22304 550 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 IL32P24001 234 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 ETV5P41161 510 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 ETV1P50549 477 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 SNTA1Q13424 505 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 ZNF267Q14586 743 aaPredicted RBP16.04■□□□□ 0.16
LITAF-209ENST00000571688 UBE2R2Q712K3 238 aaPredicted RBP16.04■□□□□ 0.16
LITAF-209ENST00000571688 OR52I1Q8NGK6 324 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 HUS1BQ8NHY5 278 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 TMEM38AQ9H6F2 299 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 RANBP3Q9H6Z4 567 aaPredicted RBP16.04■□□□□ 0.16
LITAF-209ENST00000571688 NT5DC2Q9H857 520 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 SPATA6Q9NWH7 488 aaPredicted RBP16.04■□□□□ 0.16
LITAF-209ENST00000571688 PCDHB8Q9UN66 801 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 SLC22A14Q9Y267 594 aa16.04■□□□□ 0.16
LITAF-209ENST00000571688 KIAA1671Q9BY89 1806 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 RAB36O95755 333 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 GSTM5P46439 218 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 RPS24P62847 133 aaKnown RBP16.03■□□□□ 0.16
LITAF-209ENST00000571688 ACSM2AQ08AH3 577 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 CHIT1Q13231 466 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 POU4F3Q15319 338 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 COL28A1Q2UY09 1125 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 ACSM2BQ68CK6 577 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 BICRALQ6AI39 1079 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 GPR139Q6DWJ6 353 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 CASP12Q6UXS9 341 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 FAM92BQ6ZTR7 304 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 MOB2Q70IA6 237 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 OR52N2Q8NGI0 321 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 C1GALT1C1Q96EU7 318 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 NCKAP1Q9Y2A7 1128 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 A0A0A6YYJ9 748 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 TRBV4-1A0A0J9YWV2 114 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 RNASET2O00584 256 aaKnown RBP16.03■□□□□ 0.16
LITAF-209ENST00000571688 SLC9A3R1O14745 358 aaPredicted RBP16.03■□□□□ 0.16
LITAF-209ENST00000571688 LRRTM2O43300 516 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 CD160O95971 181 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 BPIP17213 487 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 RAE1P78406 368 aaKnown RBP16.03■□□□□ 0.16
LITAF-209ENST00000571688 ZNF33BQ06732 778 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 CRTC2Q53ET0 693 aaPredicted RBP16.03■□□□□ 0.16
LITAF-209ENST00000571688 CLLU1Q5K131 121 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 LYPLAL1Q5VWZ2 237 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 TCEANCQ8N8B7 351 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 HJURPQ8NCD3 748 aaPredicted RBP16.03■□□□□ 0.16
LITAF-209ENST00000571688 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.03■□□□□ 0.166e-14■■■■■ 70.6
LITAF-209ENST00000571688 WDR20Q8TBZ3 569 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 TOE1Q96GM8 510 aaKnown RBP16.03■□□□□ 0.16
LITAF-209ENST00000571688 SORCS2Q96PQ0 1159 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 ATF6BQ99941 703 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 SLC12A9Q9BXP2 914 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 RETREG1Q9H6L5 497 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 EMC7Q9NPA0 242 aa16.03■□□□□ 0.16
LITAF-209ENST00000571688 IL26Q9NPH9 171 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms