RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 HS6ST1O60243 411 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 HOXC4P09017 264 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 ACAA1P09110 424 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 RAB3AP20336 220 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TSPAN5P62079 268 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TLE1Q04724 770 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TAF1CQ15572 869 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 XKR7Q5GH72 579 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 FSTL4Q6MZW2 842 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 AHSA2Q719I0 299 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 MRPL52Q86TS9 123 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 SLC30A8Q8IWU4 369 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 IL31RAQ8NI17 732 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 UPRTQ96BW1 309 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 POM121Q96HA1 1249 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SLC38A2Q96QD8 506 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TMEM106CQ9BVX2 250 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SLC19A3Q9BZV2 496 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 PRDM12Q9H4Q4 367 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ZIM2Q9NZV7 527 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CPA4Q9UI42 421 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 DYRK1BQ9Y463 629 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 DFFAO00273 331 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CHP2O43745 196 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 GLAP06280 429 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SLC2A2P11168 524 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 HNRNPLP14866 589 aaKnown RBP eCLIP2.8□□□□□ -1.969e-7■■■■□ 22.4
CHD9-218ENST00000566029 NFKB1P19838 968 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 RFC3P40938 356 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 HTR6P50406 440 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TKTL1P51854 596 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CHRNB3Q05901 458 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 C2orf80Q0P641 193 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CAMK2GQ13555 558 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 SLC9A3R2Q15599 337 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SLC27A4Q6P1M0 643 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 FBXO42Q6P3S6 717 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 PKN3Q6P5Z2 889 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 C19orf35Q6ZS72 473 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 RPS27LQ71UM5 84 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 SLC41A1Q8IVJ1 513 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SLC22A9Q8IVM8 553 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 BHLHE41Q9C0J9 482 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.8□□□□□ -1.961e-6■■■■■ 28.4
CHD9-218ENST00000566029 GORASP2Q9H8Y8 452 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 IL21RQ9HBE5 538 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 BIN3Q9NQY0 253 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.8□□□□□ -1.96
CHD9-218ENST00000566029 LOC100130705A0A1B0GUX0 176 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 AIPO00170 330 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 EDN1P05305 212 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 H2AFB1P0C5Y9 115 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 H2AFB2P0C5Z0 115 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CALCRP30988 508 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 EPHA5P54756 1037 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 HAGHLQ6PII5 290 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 OR2T12Q8NG77 320 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ULK4Q96C45 1275 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ZNF416Q9BWM5 594 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 C1QTNF6Q9BXI9 259 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 QTRT2Q9H974 415 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 ALKBH4Q9NXW9 302 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ING1Q9UK53 422 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 IRGMA1A4Y4 181 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TMEM150BA6NC51 233 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 LRIT2A6NDA9 550 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ACKR2O00590 384 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 MYL12BO14950 172 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 MFSD11O43934 449 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 KRT33AO76009 404 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 QDPRP09417 244 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ACSM4P0C7M7 580 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 WARSP23381 471 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 AZGP1P25311 298 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 APEX1P27695 318 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 SOX10P56693 466 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 UBE2KP61086 200 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 STX4Q12846 297 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 FAM187BQ17R55 369 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 COL28A1Q2UY09 1125 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 MANEALQ5VSG8 457 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ABLIM2Q6H8Q1 611 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 WASH2PQ6VEQ5 465 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 NLRC3Q7RTR2 1065 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ABI3BPQ7Z7G0 1075 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SLC51AQ86UW1 340 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 GPR151Q8TDV0 419 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TOX2Q96NM4 488 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TAPBPLQ9BX59 468 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 PPP1R3EQ9H7J1 279 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 KCNH7Q9NS40 1196 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CISHQ9NSE2 258 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 RNF19AQ9NV58 838 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TMEM184CQ9NVA4 438 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 MIOSQ9NXC5 875 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 UBQLN2Q9UHD9 624 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ZNF490Q9ULM2 529 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 SCN7AQ01118 1682 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 WASHC1A8K0Z3 465 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 S1PR4O95977 384 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms