RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 A8MVJ9 347 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 SLC28A1O00337 649 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 BTN3A3O00478 584 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 TOR1AO14656 332 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 ORC5O43913 435 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 TPOP07202 933 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 MMP2P08253 660 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 ICAM2P13598 275 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 FOSL2P15408 326 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 PCSK2P16519 638 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 RPS3P23396 243 aaKnown RBP eCLIP10.58□□□□□ -0.72
TCF4-222ENST00000564228 PTX3P26022 381 aaPredicted RBP10.58□□□□□ -0.72
TCF4-222ENST00000564228 PTBP1P26599 531 aaKnown RBP eCLIP10.58□□□□□ -0.726e-7■■■■■ 31.5
TCF4-222ENST00000564228 RPL38P63173 70 aaKnown RBP10.58□□□□□ -0.72
TCF4-222ENST00000564228 VLDLRP98155 873 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 HOXC5Q00444 222 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 AANATQ16613 207 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 COL28A1Q2UY09 1125 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 GTDC1Q4AE62 458 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 BRAT1Q6PJG6 821 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 MSANTD1Q6ZTZ1 278 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 CBLL1Q75N03 491 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 GPAT4Q86UL3 456 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 CDH24Q86UP0 819 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 NLRP8Q86W28 1048 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 ADGRG3Q86Y34 549 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 GPSM1Q86YR5 675 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 PNPLA1Q8N8W4 532 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 ARRDC2Q8TBH0 407 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 SUSD6Q92537 303 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 PMEPA1Q969W9 287 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 TRMT61AQ96FX7 289 aaKnown RBP10.58□□□□□ -0.72
TCF4-222ENST00000564228 TBATAQ96M53 351 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 MARVELD1Q9BSK0 173 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 UBE2ZQ9H832 354 aaPredicted RBP10.58□□□□□ -0.72
TCF4-222ENST00000564228 ERVMER34-1Q9H9K5 563 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 SH3BP4Q9P0V3 963 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 SLC25A13Q9UJS0 675 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 POFUT2Q9Y2G5 429 aa10.58□□□□□ -0.72
TCF4-222ENST00000564228 LINC00854A0A1B0GVQ3 168 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 HYKKA2RU49 373 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 FABP12A6NFH5 140 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 TUBAL3A6NHL2 446 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 BTN3A1O00481 513 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 SMAD6O43541 496 aaKnown RBP10.57□□□□□ -0.72
TCF4-222ENST00000564228 BNIP3LO60238 219 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 IL1AP01583 271 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 CSF2P04141 144 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 FAM157BP0CG42 384 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 NAT2P11245 290 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 SLC2A4P14672 509 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 GPC1P35052 558 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 SLC6A11P48066 632 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 CRISP3P54108 245 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 RUNX3Q13761 415 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 IHHQ14623 411 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 PTGR1Q14914 329 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 PCBP2Q15366 365 aaKnown RBP eCLIP10.57□□□□□ -0.72
TCF4-222ENST00000564228 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.57□□□□□ -0.72
TCF4-222ENST00000564228 SIRPB2Q5JXA9 342 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 ATXN7L2Q5T6C5 722 aaPredicted RBP10.57□□□□□ -0.72
TCF4-222ENST00000564228 TMEM215Q68D42 235 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 TYW3Q6IPR3 259 aaKnown RBP10.57□□□□□ -0.72
TCF4-222ENST00000564228 MTSS1LQ765P7 747 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 ADIPOR2Q86V24 386 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 COMMD7Q86VX2 200 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.57□□□□□ -0.72
TCF4-222ENST00000564228 ANKRD53Q8N9V6 530 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 OR52B6Q8NGF0 335 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 OR6K2Q8NGY2 324 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 OR8K5Q8NH50 307 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 NUDT8Q8WV74 236 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 SORCS1Q8WY21 1168 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 AKAP1Q92667 903 aaKnown RBP eCLIP10.57□□□□□ -0.72
TCF4-222ENST00000564228 TADA1Q96BN2 335 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 ULK4Q96C45 1275 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 OPALINQ96PE5 141 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 KCNC2Q96PR1 638 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 OR5M11Q96RB7 305 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 CNPPD1Q9BV87 410 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 TRMT61BQ9BVS5 477 aaKnown RBP10.57□□□□□ -0.72
TCF4-222ENST00000564228 CIPCQ9C0C6 399 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 MIXL1Q9H2W2 232 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 SERHLQ9NQF3 203 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 RAD18Q9NS91 495 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 LHX3Q9UBR4 397 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 PCDHGB7Q9Y5F8 929 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 PCDHGA2Q9Y5H1 932 aa10.57□□□□□ -0.72
TCF4-222ENST00000564228 TCF20Q9UGU0 1960 aaKnown RBP10.57□□□□□ -0.72
TCF4-222ENST00000564228 MPZL2O60487 215 aa10.56□□□□□ -0.72
TCF4-222ENST00000564228 OTCP00480 354 aa10.56□□□□□ -0.72
TCF4-222ENST00000564228 RAF1P04049 648 aa10.56□□□□□ -0.72
TCF4-222ENST00000564228 HOXD4P09016 255 aaPredicted RBP10.56□□□□□ -0.72
TCF4-222ENST00000564228 PRKAR1AP10644 381 aa10.56□□□□□ -0.72
TCF4-222ENST00000564228 HOXB1P14653 301 aaPredicted RBP10.56□□□□□ -0.72
TCF4-222ENST00000564228 PTPN6P29350 595 aa10.56□□□□□ -0.72
TCF4-222ENST00000564228 DSTNP60981 165 aa10.56□□□□□ -0.72
TCF4-222ENST00000564228 BTG1P62324 171 aa10.56□□□□□ -0.72
TCF4-222ENST00000564228 MED22Q15528 200 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms