RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 NPBWR1P48145 328 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 SOX2P48431 317 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 CAP1Q01518 475 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 KIAA0319LQ8IZA0 1049 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 OR2T33Q8NG76 320 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 MOB1AQ9H8S9 216 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 CHEK1O14757 476 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 ADRB3P13945 408 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 HNF1BP35680 557 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF33AQ06730 810 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 SGCZQ96LD1 299 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 RNF208Q9H0X6 261 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 SLC28A3Q9HAS3 691 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 CREG1O75629 220 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 SPDEFO95238 335 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZIC2O95409 532 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 METTL15P1P0C7V9 234 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 FPR1P21462 350 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 TPRA1Q86W33 373 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 TET3O43151 1660 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 CHRM1P11229 460 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 MARCKSL1P49006 195 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 P2RX1P51575 399 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 BEX3Q00994 111 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 IL10RBQ08334 325 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 HMGN3Q15651 99 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 HIST2H3PS2Q5TEC6 136 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 METTL11BQ5VVY1 283 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 LIPKQ5VXJ0 399 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 ST7LQ8TDW4 575 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 RDH12Q96NR8 316 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 SLC25A31Q9H0C2 315 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZFR2Q9UPR6 939 aaKnown RBP13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 A0A1W2PPV4 95 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 A0A1W2PS29 197 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 CBLP22681 906 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 RFTN1Q14699 578 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 TMEM236Q5W0B7 351 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 KCTD20Q7Z5Y7 419 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 LPPQ93052 612 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 UPRTQ96BW1 309 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 OR52B2Q96RD2 323 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 SLC31A1O15431 190 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 MSI1O43347 362 aaKnown RBP13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 SOX30O94993 753 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 AK4P27144 223 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 WASP42768 502 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 PGAP1Q75T13 922 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 FBXO22Q8NEZ5 403 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 COQ10AQ96MF6 247 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 APMAPQ9HDC9 416 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 DNAJC5BQ9UF47 199 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 CLEC4EQ9ULY5 219 aa13.35□□□□□ -0.27
CSPG4P12-202ENST00000559989 IMPDH1P20839 514 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 CLCN2P51788 898 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 MAP2K5Q13163 448 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 GTF2H5Q6ZYL4 71 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 FUCA2Q9BTY2 467 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 TMEM150BA6NC51 233 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 MZT1Q08AG7 82 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 PCBP2Q15366 365 aaKnown RBP eCLIP13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 ESCO2Q56NI9 601 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 RABL3Q5HYI8 236 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF34Q8IZ26 560 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 SRA1Q9HD15 236 aaKnown RBP13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 SERTAD3Q9UJW9 196 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 IRS2Q9Y4H2 1338 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF8P17098 575 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 CAV2P51636 162 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 AGAP7PQ5VUJ5 663 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 AGAP6Q5VW22 663 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 TANGO2Q6ICL3 276 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 CMIPQ8IY22 773 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 AGAP4Q96P64 663 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 FBXO7Q9Y3I1 522 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 ERI3O43414 337 aaKnown RBP13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 PITPNBP48739 271 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 TAF10Q12962 218 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 TMEM53Q6P2H8 277 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 RRAGCQ9HB90 399 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 FAM120CQ9NX05 1096 aaKnown RBP13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 B4GALT7Q9UBV7 327 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 FETUBQ9UGM5 382 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 COL1A2P08123 1366 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 RFPL3O75679 317 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 BEST1O76090 585 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 PTH2RP49190 550 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 FLYWCH1Q4VC44 716 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 ATPAF1Q5TC12 328 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 FAM122AQ96E09 287 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF436Q9C0F3 470 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 ERVK13-1Q9NX77 482 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 KLHL9Q9P2J3 617 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 PCDHB3Q9Y5E6 796 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 TOR1AO14656 332 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 TNFSF12O43508 249 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 SNAP29O95721 258 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 TFP02787 698 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms